Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU4-35P-201ENST00000362588 141 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-414P-201ENST00000363705 104 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 SNORD24-201ENST00000383884 75 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 MIR548A2-201ENST00000384956 97 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 RNU1-101P-201ENST00000391171 127 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-830P-201ENST00000516353 107 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 RNY4P20-201ENST00000516678 93 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 AC025521.1-201ENST00000621624 286 ntBASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.63□□□□□ -1.83
NUCKS1Q9H1E3 SNORD56.3-201ENST00000363507 71 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 MIR7-3-201ENST00000384898 110 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 SNORD17-201ENST00000390930 237 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 RPS26P48-201ENST00000491713 339 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.666-201ENST00000516187 112 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-904P-201ENST00000516206 101 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-1096P-201ENST00000517089 102 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 AC141557.1-201ENST00000540982 400 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 MIR376A2-201ENST00000636782 80 ntBASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NUCKS1Q9H1E3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 SNORA63.1-201ENST00000362493 131 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 MT-TI-201ENST00000387365 69 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 CST9LP2-201ENST00000437612 320 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 RPS29P21-201ENST00000496272 170 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 AC007536.1-201ENST00000533382 349 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 uc_338.1-201ENST00000612113 180 ntBASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
NUCKS1Q9H1E3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 AC092435.3-201ENST00000565538 3654 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.342-201ENST00000365352 113 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 U8.9-201ENST00000365667 134 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 MIR887-201ENST00000401258 79 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 AC107297.1-201ENST00000459991 176 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 RNA5SP217-201ENST00000515959 91 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-693P-201ENST00000516134 107 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 AC026421.1-201ENST00000519101 163 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 AF117829.1-206ENST00000621883 3802 ntBASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NUCKS1Q9H1E3 MIR302B-201ENST00000362188 73 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 RNY1P10-201ENST00000363268 113 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 RNU6-1134P-201ENST00000365156 101 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 Y_RNA.621-201ENST00000411065 96 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 RPL32P35-201ENST00000415214 394 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AC104332.2-201ENST00000429959 156 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AC084364.2-201ENST00000546924 395 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 MIR5197-201ENST00000583721 112 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AC008507.4-201ENST00000585464 127 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AC090115.4-201ENST00000609970 188 ntBASIC3.59□□□□□ -1.83
NUCKS1Q9H1E3 AC008264.2-201ENST00000610193 3731 ntBASIC3.59□□□□□ -1.84
NUCKS1Q9H1E3 MIR208A-201ENST00000362287 71 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-486P-201ENST00000363116 107 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 PGBD4P5-201ENST00000445958 426 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 HMGN1P7-201ENST00000491722 313 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 RNU2-34P-201ENST00000516534 121 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AC103810.1-201ENST00000579873 453 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 AL590808.1-201ENST00000618696 141 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 MIR7975-201ENST00000619350 68 ntBASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.93-201ENST00000363066 109 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-438P-201ENST00000365561 103 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 MIR518F-201ENST00000384973 87 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 MIR520G-201ENST00000385064 90 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 SNRPGP10-201ENST00000432323 225 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 SNRPGP13-201ENST00000442212 177 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 AC115115.1-201ENST00000449927 248 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
NUCKS1Q9H1E3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 AL049781.1-201ENST00000623195 3585 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 MIR148B-201ENST00000362252 99 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 RNU6-690P-201ENST00000365242 106 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 MIR759-201ENST00000390224 91 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 SNORA26.7-201ENST00000391288 122 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 RNA5SP38-201ENST00000410750 119 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
NUCKS1Q9H1E3 SNORD59.2-201ENST00000516873 68 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms