Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORA4.4-201ENST00000515921 135 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR449C-201ENST00000516047 92 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-68P-201ENST00000516576 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 AC027308.1-201ENST00000517993 110 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 CYP3A54P-201ENST00000566950 75 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 MRPS21P9-201ENST00000571150 257 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 SNORD84-203ENST00000584275 78 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 AC020916.2-201ENST00000591242 360 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR6811-201ENST00000620409 58 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 AF117829.1-206ENST00000621883 3802 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 MIR6719-201ENST00000622428 87 ntBASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-4Q9BYR3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-4Q9BYR3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AL138820.1-201ENST00000617901 5305 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA64.1-201ENST00000362600 132 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORD114-4-201ENST00000363962 75 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNA5SP435-201ENST00000364044 108 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA16A-201ENST00000384342 137 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-171P-201ENST00000384354 107 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-748P-201ENST00000384648 107 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR452-201ENST00000385020 85 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR563-201ENST00000385080 79 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR517C-201ENST00000385103 95 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR516B2-201ENST00000385190 85 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA17.4-201ENST00000391287 132 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR541-201ENST00000401360 84 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1043P-201ENST00000410355 99 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SKP206-201ENST00000410823 293 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AL117339.2-201ENST00000430475 180 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ACA64.4-201ENST00000459070 127 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORD123-201ENST00000459473 70 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL221P-201ENST00000466190 281 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RN7SL808P-201ENST00000496066 299 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU7-154P-201ENST00000516194 62 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 RNU6-1262P-201ENST00000516217 96 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SNORA25.16-201ENST00000516741 121 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 PARP1P2-201ENST00000556806 195 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AC021739.1-201ENST00000559631 174 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4776-2-201ENST00000580204 80 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR1269B-201ENST00000580405 75 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR4701-201ENST00000583094 63 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AC067852.5-201ENST00000589299 310 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AC011445.2-201ENST00000599274 173 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR6809-201ENST00000612189 116 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MIR7159-201ENST00000620587 66 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 AC140479.6-201ENST00000633535 357 ntBASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-4Q9BYR3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms