Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RN7SL274P-201ENST00000492268 272 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNU6-635P-201ENST00000516651 102 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1309P-201ENST00000363305 108 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.222-201ENST00000364264 102 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.230-201ENST00000364348 109 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1175P-201ENST00000365200 107 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.462-201ENST00000384268 102 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 MIR548F4-201ENST00000408515 105 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU6-121P-201ENST00000410525 99 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC096920.1-201ENST00000423991 241 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AL358176.2-201ENST00000425769 204 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 DYNLT3P2-201ENST00000442517 295 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC009474.2-201ENST00000451383 136 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 LINC01399-202ENST00000458450 244 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC098869.1-201ENST00000481627 292 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC011406.1-201ENST00000512440 370 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AL117187.1-201ENST00000555482 181 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC008749.1-201ENST00000597650 306 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 U1.36-201ENST00000620684 176 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC006001.4-201ENST00000622243 395 ntBASIC1.81□□□□□ -2.12
RTP3Q9BQQ7 AC245060.5-201ENST00000610778 3293 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.276-201ENST00000364732 109 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 SNORD63-201ENST00000384262 68 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.512-201ENST00000384518 102 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 SNORD115-46-201ENST00000390982 71 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 RNU4-30P-201ENST00000410245 143 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 RNU6-966P-201ENST00000516479 104 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 MIR4423-201ENST00000580922 80 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 MIR4300-201ENST00000581016 96 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 AC005786.1-201ENST00000588553 154 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 AC011373.1-201ENST00000607270 237 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 MIR376A1-201ENST00000616574 68 ntBASIC1.8□□□□□ -2.12
RTP3Q9BQQ7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 RNA5SP276-201ENST00000362580 94 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.133-201ENST00000363428 110 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1240P-201ENST00000365155 104 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 RNU6-42P-201ENST00000384165 107 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.446-201ENST00000384178 104 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 MIR676-201ENST00000390702 67 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 snosnR66.1-201ENST00000391095 99 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 AL117342.1-201ENST00000404861 406 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 AC244636.1-201ENST00000421152 228 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 HMGN1P10-201ENST00000474557 553 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 RNU7-110P-201ENST00000516891 62 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 PRR13P7-201ENST00000605538 430 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 AC022441.3-201ENST00000605737 136 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 MIR338-201ENST00000636369 67 ntBASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.47-201ENST00000362697 108 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNU6-862P-201ENST00000362804 105 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 SNORD113-8-201ENST00000363497 74 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.176-201ENST00000363815 109 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.287-201ENST00000364853 94 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 MIR215-201ENST00000384858 110 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNU2-54P-201ENST00000410299 190 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 Y_RNA.602-201ENST00000410535 92 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNA5SP501-201ENST00000410990 112 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RPL21P38-201ENST00000418090 167 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AC099677.2-201ENST00000436385 175 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 HMGN2P34-201ENST00000437647 269 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AL731563.1-201ENST00000442202 214 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 SNORD65B-201ENST00000459126 73 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNU6-1143P-201ENST00000516125 104 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 RNU2-12P-201ENST00000517216 168 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AL162730.1-201ENST00000605734 292 ntBASIC1.78□□□□□ -2.12
RTP3Q9BQQ7 AL353149.1-201ENST00000610667 244 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms