Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
SYNGAP1Q96PV0 CENPCP1-201ENST00000533085 2578 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-486P-201ENST00000363116 107 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 Y_RNA.251-201ENST00000364551 99 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-476P-201ENST00000384726 107 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 AC063976.3-201ENST00000426849 329 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 AL357134.1-201ENST00000445848 426 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RN7SL75P-201ENST00000461926 281 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 AC090515.1-201ENST00000465295 476 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-1061P-201ENST00000516530 99 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-711P-201ENST00000517255 106 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-586P-201ENST00000517265 104 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNGAP1Q96PV0 AL159152.1-201ENST00000635019 2587 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-743P-201ENST00000364151 106 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 MIR218-1-201ENST00000384999 110 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 RNU2-70P-201ENST00000410718 179 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 RN7SKP192-201ENST00000411291 327 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 RNU6-197P-201ENST00000516680 100 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 AC133485.4-201ENST00000561835 220 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 AC138907.4-201ENST00000570107 226 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.34□□□□□ -1.87
SYNGAP1Q96PV0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.34□□□□□ -1.88
SYNGAP1Q96PV0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC093831.2-201ENST00000624393 3427 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 U8.1-201ENST00000362843 134 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 SNORA9.2-201ENST00000365361 133 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-597P-201ENST00000365620 102 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-429P-201ENST00000384582 108 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 MIR7-2-201ENST00000384970 110 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC010154.1-201ENST00000425857 269 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC008413.1-201ENST00000511864 177 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 Y_RNA.692-201ENST00000516627 105 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 IGKV3-31-201ENST00000523109 329 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 RPL23AP91-201ENST00000569211 455 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 Z82209.1-201ENST00000422141 2135 ntBASIC3.33□□□□□ -1.88
SYNGAP1Q96PV0 SNORD31B-201ENST00000364977 69 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 SNORD18B-201ENST00000365659 72 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AC008134.1-201ENST00000420943 193 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AC025647.1-201ENST00000517879 253 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AC015720.1-201ENST00000565251 277 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AL929325.1-201ENST00000603096 117 ntBASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.32□□□□□ -1.88
SYNGAP1Q96PV0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-674P-201ENST00000363831 107 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 SNORA22-201ENST00000383907 134 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 RN7SKP101-201ENST00000411376 320 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 AC087499.2-201ENST00000432861 149 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 AL513328.1-201ENST00000446460 224 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 RPS29P21-201ENST00000496272 170 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 CKS1BP2-201ENST00000497342 240 ntBASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SYNGAP1Q96PV0 RNA5SP99-201ENST00000364020 114 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-1144P-201ENST00000384247 104 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 MIR489-201ENST00000384923 84 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 RNU6-772P-201ENST00000516042 105 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 AC108081.1-201ENST00000604358 221 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
SYNGAP1Q96PV0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 SNORA72-201ENST00000384339 132 ntBASIC3.29□□□□□ -1.88
SYNGAP1Q96PV0 RNY4P18-201ENST00000391107 89 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms