Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 RNU6-633P-201ENST00000362612 103 ntBASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 RNA5SP261-201ENST00000410536 106 ntBASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 CST2P1-201ENST00000425770 87 ntBASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 AC090821.2-201ENST00000523552 176 ntBASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MS4A4AQ96JQ5 ICE2P2-201ENST00000483823 2787 ntBASIC4.34□□□□□ -1.72
MS4A4AQ96JQ5 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MS4A4AQ96JQ5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 AC092881.1-201ENST00000638218 2733 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 NEAT1-202ENST00000501122 22743 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 RNA5SP295-201ENST00000362655 121 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 MIR218-1-201ENST00000384999 110 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 SRIP3-201ENST00000413200 219 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 AL163195.1-201ENST00000496941 348 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 AC108729.3-201ENST00000513484 108 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 IGLV3-17-201ENST00000519099 244 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 MIR8057-201ENST00000620957 69 ntBASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MS4A4AQ96JQ5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 Y_RNA.316-201ENST00000365118 111 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RNU6-1319P-201ENST00000390855 104 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RNU6-747P-201ENST00000390928 104 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RNU6-241P-201ENST00000391148 104 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 AP000567.1-201ENST00000406413 156 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RNU2-63P-201ENST00000410792 194 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RNU6-177P-201ENST00000411257 104 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 RN7SL297P-201ENST00000483161 293 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 MIR3199-1-201ENST00000582434 88 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 AL137849.1-201ENST00000604767 169 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 MFSD8-233ENST00000641482 4860 ntBASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MS4A4AQ96JQ5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 AC096644.4-201ENST00000563417 2912 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 SNORA70.7-201ENST00000384159 133 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 AL135938.1-201ENST00000443141 297 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 UBL5P3-201ENST00000475112 231 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 RNA5SP33-201ENST00000516687 98 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 ELOCP29-201ENST00000588193 334 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 SCARNA15.3-201ENST00000626315 122 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 SCARNA4.1-201ENST00000628597 123 ntBASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
MS4A4AQ96JQ5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 RNU1-23P-201ENST00000363361 144 ntBASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
MS4A4AQ96JQ5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 RNA5SP502-201ENST00000362694 119 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 Y_RNA.171-201ENST00000363760 102 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 Y_RNA.191-201ENST00000363972 113 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 SNORA25.6-201ENST00000364121 118 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 MIR561-201ENST00000385216 97 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 RNA5SP309-201ENST00000516670 106 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 uc_338.25-201ENST00000613756 156 ntBASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
MS4A4AQ96JQ5 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 RNA5SP139-201ENST00000364340 117 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 RNU6-163P-201ENST00000384396 106 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms