Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNA5SP390-201ENST00000410191 113 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 AC023141.4-201ENST00000412031 328 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 SNRPGP8-201ENST00000454064 226 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 RPS29P20-201ENST00000489592 171 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 Y_RNA.757-201ENST00000578934 114 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 AC090115.4-201ENST00000609970 188 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 SNORD98-201ENST00000636377 67 ntBASIC2.75□□□□□ -1.97
CHFRQ96EP1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHFRQ96EP1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHFRQ96EP1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 Y_RNA.114-201ENST00000363265 113 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 SNORD45.3-201ENST00000363836 72 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNU6-32P-201ENST00000383948 107 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNU6-13P-201ENST00000384248 107 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNU6-12P-201ENST00000384604 107 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNU6-41P-201ENST00000384741 107 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 MIR181A2-201ENST00000384863 110 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNY4P30-201ENST00000410216 95 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 RNU6-1061P-201ENST00000516530 99 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 AL590808.1-201ENST00000618696 141 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
CHFRQ96EP1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.74□□□□□ -1.97
CHFRQ96EP1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHFRQ96EP1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 MIR367-201ENST00000362299 68 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 RNU6-508P-201ENST00000363231 103 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 SNORD58C-201ENST00000365223 64 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 RNU6-144P-201ENST00000383951 107 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 MIR548A3-201ENST00000385297 97 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 Y_RNA.617-201ENST00000410920 90 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 MLLT10P1-201ENST00000418346 262 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC004386.2-201ENST00000441858 148 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 Y_RNA.692-201ENST00000516627 105 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 RNU6-344P-201ENST00000516635 111 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC090142.3-201ENST00000519012 385 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC133485.4-201ENST00000561835 220 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC138907.4-201ENST00000570107 226 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 MIR378D2-201ENST00000580636 98 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC104984.5-201ENST00000586878 94 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 AC068205.3-201ENST00000636385 468 ntBASIC2.73□□□□□ -1.97
CHFRQ96EP1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
CHFRQ96EP1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHFRQ96EP1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHFRQ96EP1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHFRQ96EP1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CHFRQ96EP1 MIR26A1-201ENST00000362205 77 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNA5SP432-201ENST00000362480 116 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 Y_RNA.116-201ENST00000363292 103 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNU6-978P-201ENST00000364371 103 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNU6-487P-201ENST00000365430 104 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNY3P5-201ENST00000384127 102 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 SNORA67.2-201ENST00000384300 149 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 MIR320B2-201ENST00000408479 138 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNA5SP201-201ENST00000410316 124 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 HMGN2P10-201ENST00000448085 265 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RPS29P24-201ENST00000486345 171 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 AC117454.1-201ENST00000491120 168 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNU6-781P-201ENST00000516377 101 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 Y_RNA.677-201ENST00000516401 85 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNU1-104P-201ENST00000517280 175 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 RNU2-60P-201ENST00000517290 128 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 AC025754.2-201ENST00000606491 432 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 SNORD11B-201ENST00000607707 90 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 uc_338.28-201ENST00000612082 187 ntBASIC2.72□□□□□ -1.97
CHFRQ96EP1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.72□□□□□ -1.97
CHFRQ96EP1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CHFRQ96EP1 RNA5SP289-201ENST00000362332 137 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 Y_RNA.120-201ENST00000363304 110 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 SNORA67.1-201ENST00000364749 141 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 Y_RNA.388-201ENST00000383919 113 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 RNU2-49P-201ENST00000410666 184 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 AC027124.2-201ENST00000428249 105 ntBASIC2.71□□□□□ -1.98
CHFRQ96EP1 AC245047.4-201ENST00000433189 144 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms