Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 Y_RNA.154-201ENST00000363624 102 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 RNU4-13P-201ENST00000364019 141 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 RNY3P1-201ENST00000365085 102 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 RNY3-201ENST00000365484 102 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.466-201ENST00000384294 113 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.496-201ENST00000384444 101 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 MIR194-1-201ENST00000384892 85 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 MTCO3P19-201ENST00000415864 321 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 RAB28P5-201ENST00000427490 651 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 AL162424.1-201ENST00000602325 221 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 AL078604.3-201ENST00000615580 211 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 U2.1-201ENST00000618978 145 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 AC018630.2-201ENST00000534866 2403 ntBASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.252-201ENST00000364556 101 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 SNORA20B-201ENST00000384220 132 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 PGBD4P5-201ENST00000445958 426 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 CHEK2P4-201ENST00000450340 246 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 SNORA31.10-201ENST00000516482 106 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 AC005828.6-201ENST00000606610 232 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 SNORA28-201ENST00000606769 126 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 MIR4272-201ENST00000635924 64 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 MIR3674-201ENST00000636576 68 ntBASIC1.37□□□□□ -2.19
SNRNP40Q96DI7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.5-201ENST00000362334 102 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNU6-454P-201ENST00000364292 107 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.315-201ENST00000365117 102 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.428-201ENST00000384078 102 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.509-201ENST00000384506 99 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNU6-376P-201ENST00000384731 106 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 MIR562-201ENST00000384894 95 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AL355796.1-201ENST00000406706 323 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RPS27P16-201ENST00000425758 201 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AC096644.2-201ENST00000429278 159 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 STAG3L5P-204ENST00000443759 179 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AC097462.1-201ENST00000514125 324 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNA5SP20-201ENST00000515976 84 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNU6-976P-201ENST00000516086 111 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNU6-1012P-201ENST00000516606 109 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNU2-56P-201ENST00000516826 190 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 PRR13P7-201ENST00000605538 430 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AL133255.1-201ENST00000606374 441 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 SNORD3E-202ENST00000627253 216 ntBASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 RNU1-115P-201ENST00000365329 160 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 RNY1P14-201ENST00000384426 108 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 AC018865.2-201ENST00000423631 129 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 FCF1P4-201ENST00000448326 183 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 SNORD116.3-201ENST00000517176 78 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 VN1R91P-201ENST00000594377 169 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 C8orf59P2-201ENST00000603441 271 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 MIR6079-201ENST00000635807 62 ntBASIC1.35□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.27-201ENST00000362540 103 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 RNU1-22P-201ENST00000363334 158 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 RNU6-961P-201ENST00000363893 105 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 RNU6-926P-201ENST00000384075 107 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 Y_RNA.579-201ENST00000390939 94 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 SNORD78.2-201ENST00000391076 69 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 SUMO1P2-201ENST00000452524 304 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 AC073349.3-201ENST00000617616 186 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 AC104985.2-201ENST00000620598 500 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 U6.115-201ENST00000636045 103 ntBASIC1.34□□□□□ -2.19
SNRNP40Q96DI7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 SNORA27.1-201ENST00000362604 124 ntBASIC1.33□□□□□ -2.2
SNRNP40Q96DI7 Y_RNA.112-201ENST00000363250 102 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms