Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 AL512604.1-201ENST00000404812 257 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 RNU2-2P-201ENST00000410396 191 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 AL356379.1-201ENST00000414105 126 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 UBL5P3-201ENST00000475112 231 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 RNU7-99P-201ENST00000516271 62 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 DEFB117-201ENST00000602356 141 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 AC127459.3-201ENST00000624328 466 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 ZNF355P-201ENST00000427301 3216 ntBASIC2.43□□□□□ -2.02
CHMP4CQ96CF2 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 RNU6-376P-201ENST00000384731 106 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 MIR215-201ENST00000384858 110 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 MIR1302-3-201ENST00000408128 138 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 RNU2-61P-201ENST00000411069 191 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 EBAG9P1-201ENST00000418955 543 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 MIR3145-201ENST00000580727 82 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 AC005034.5-201ENST00000604219 466 ntBASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CHMP4CQ96CF2 Y_RNA.84-201ENST00000363011 104 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 Y_RNA.133-201ENST00000363428 110 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 RNA5SP160-201ENST00000364866 120 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 RNA5SP138-201ENST00000365098 114 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 RNU6-514P-201ENST00000384208 107 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 MIR1302-6-201ENST00000408466 90 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 RNU2-7P-201ENST00000410794 178 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AL158823.1-201ENST00000418441 478 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 MTND3P2-201ENST00000438452 342 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 HSPE1P13-201ENST00000451143 297 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 MTND4LP30-201ENST00000454092 297 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 TRBVB-201ENST00000477100 408 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 MTCO2P24-201ENST00000515611 426 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AC073413.2-201ENST00000604332 360 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 AL162730.1-201ENST00000605734 292 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 MIR8062-201ENST00000621515 85 ntBASIC2.41□□□□□ -2.02
CHMP4CQ96CF2 Y_RNA.461-201ENST00000384263 103 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 Y_RNA.541-201ENST00000384640 113 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 RNU6-855P-201ENST00000410395 104 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 AC003989.2-201ENST00000440224 169 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 RNU6-717P-201ENST00000459076 104 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 AL163195.1-201ENST00000496941 348 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 RNU6-1337P-201ENST00000516525 95 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 SUB1P4-201ENST00000566062 339 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 uc_338.20-201ENST00000621563 178 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.4□□□□□ -2.03
CHMP4CQ96CF2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 SNORA25.1-201ENST00000362326 128 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 MIR520A-201ENST00000384862 85 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 snosnR66.1-201ENST00000391095 99 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 MTCYBP9-201ENST00000431021 303 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 RNU2-31P-201ENST00000516954 155 ntBASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHMP4CQ96CF2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 RNU4-80P-201ENST00000363200 141 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 RNA5SP212-201ENST00000391223 107 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 RNU6-1203P-201ENST00000410703 110 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 AL445646.1-201ENST00000431784 216 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 AC245047.4-201ENST00000433189 144 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 RNU7-94P-201ENST00000459576 63 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 RNU7-128P-201ENST00000517247 62 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CHMP4CQ96CF2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 Y_RNA.136-201ENST00000363444 102 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 SNORA40.18-201ENST00000391200 128 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 AL591806.2-201ENST00000433122 173 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 RPL23AP6-201ENST00000446637 472 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 RPS26P45-201ENST00000471748 340 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 AL096840.1-201ENST00000603287 93 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 U6.108-201ENST00000637764 58 ntBASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHMP4CQ96CF2 RNU6-112P-201ENST00000363599 104 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 RNU4-13P-201ENST00000364019 141 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 RNA5SP99-201ENST00000364020 114 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 RNU6-326P-201ENST00000365480 107 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.36□□□□□ -2.03
CHMP4CQ96CF2 HMGN1P10-201ENST00000474557 553 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms