Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RFT1Q96AA3 WWP1P1-201ENST00000466609 2769 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
RFT1Q96AA3 Y_RNA.14-201ENST00000362415 103 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 SNORD81.1-201ENST00000363064 77 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 RNU6-626P-201ENST00000363354 107 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 RNU6-1318P-201ENST00000365389 103 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 MIR515-2-201ENST00000384883 83 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 MIR515-1-201ENST00000384884 83 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 MT-TG-201ENST00000387429 68 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 MT-TR-201ENST00000387439 65 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 MIR1302-6-201ENST00000408466 90 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.6□□□□□ -2.15
RFT1Q96AA3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.6□□□□□ -2.15
RFT1Q96AA3 SNORA59A-201ENST00000459326 152 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
RFT1Q96AA3 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 Y_RNA.772-201ENST00000606692 102 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 AC006001.4-201ENST00000622243 395 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.6□□□□□ -2.15
RFT1Q96AA3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
RFT1Q96AA3 Y_RNA.179-201ENST00000363844 90 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 SNORA72.2-201ENST00000365028 127 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 RNU6-439P-201ENST00000384188 106 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.539-201ENST00000384635 107 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 MIR1185-2-201ENST00000408687 86 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 MTND4LP30-201ENST00000454092 297 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 Y_RNA.683-201ENST00000516508 93 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 RNA5SP437-201ENST00000517249 129 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC091144.1-201ENST00000519573 138 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC084364.2-201ENST00000546924 395 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC018448.1-201ENST00000552843 316 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 MIR4643-201ENST00000577473 78 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 MIR4513-201ENST00000581077 86 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.59□□□□□ -2.15
RFT1Q96AA3 AC092881.1-201ENST00000638218 2733 ntBASIC1.59□□□□□ -2.16
RFT1Q96AA3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RFT1Q96AA3 RNU6-454P-201ENST00000364292 107 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 SNORD63-201ENST00000384262 68 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 RNU2-14P-201ENST00000411053 191 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 RAB28P5-201ENST00000427490 651 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC108059.2-201ENST00000434626 151 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 RNU6-1338P-201ENST00000516328 91 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 SCARNA24.2-201ENST00000516968 130 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC005357.1-201ENST00000588399 301 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC127459.3-201ENST00000624328 466 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
RFT1Q96AA3 AC245060.5-201ENST00000610778 3293 ntBASIC1.58□□□□□ -2.16
RFT1Q96AA3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RFT1Q96AA3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNU6-1240P-201ENST00000365155 104 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNU6-651P-201ENST00000411040 105 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.57□□□□□ -2.16
RFT1Q96AA3 UQCRBP2-201ENST00000447827 297 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 MRPS10P1-201ENST00000448483 130 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNA5SP481-201ENST00000516814 122 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 RNU6-111P-201ENST00000517179 105 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
RFT1Q96AA3 AC024995.1-201ENST00000523014 93 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.57□□□□□ -2.16
RFT1Q96AA3 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
RFT1Q96AA3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
RFT1Q96AA3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RFT1Q96AA3 ZNF355P-201ENST00000427301 3216 ntBASIC1.56□□□□□ -2.16
RFT1Q96AA3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RFT1Q96AA3 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
RFT1Q96AA3 SNORA33-201ENST00000363664 130 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms