Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 MIR6504-201ENST00000613520 61 ntBASIC0.85□□□□□ -2.27
UBE2E3Q969T4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.84□□□□□ -2.27
UBE2E3Q969T4 RNU6-117P-201ENST00000365415 107 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
UBE2E3Q969T4 RNU6-318P-201ENST00000384283 103 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 RNU6-601P-201ENST00000384540 107 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 MIR520G-201ENST00000385064 90 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AC092423.1-201ENST00000430165 186 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 Z98949.2-201ENST00000440996 144 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AC107399.1-201ENST00000451226 265 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 SUMO1P2-201ENST00000452524 304 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 RPL7P42-201ENST00000481005 679 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 SNORA40.9-201ENST00000515895 93 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AF235103.2-201ENST00000525753 346 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AC136932.1-201ENST00000574771 208 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.84□□□□□ -2.27
UBE2E3Q969T4 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AC005828.6-201ENST00000606610 232 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 AC093783.1-201ENST00000612976 329 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.84□□□□□ -2.27
UBE2E3Q969T4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 RNU4-41P-201ENST00000364426 143 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.482-201ENST00000384377 111 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.83□□□□□ -2.28
UBE2E3Q969T4 MTND3P10-201ENST00000450967 341 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 LINC01399-202ENST00000458450 244 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 RNU6-1096P-201ENST00000517089 102 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 AC005899.2-201ENST00000584353 90 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.83□□□□□ -2.28
UBE2E3Q969T4 PISRT1.1-201ENST00000616930 107 ntBASIC0.83□□□□□ -2.28
UBE2E3Q969T4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBE2E3Q969T4 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.339-201ENST00000365325 102 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 RNU6-1310P-201ENST00000384153 107 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.82□□□□□ -2.28
UBE2E3Q969T4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.82□□□□□ -2.28
UBE2E3Q969T4 SNORD124-201ENST00000459577 104 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 RNU6-113P-201ENST00000516653 101 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 RNU6-1116P-201ENST00000517269 99 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.82□□□□□ -2.28
UBE2E3Q969T4 FAM106DP-201ENST00000586416 501 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 AC092794.2-201ENST00000620933 563 ntBASIC0.82□□□□□ -2.28
UBE2E3Q969T4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
UBE2E3Q969T4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.6-201ENST00000362350 114 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 SNORD114-7-201ENST00000362520 77 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.243-201ENST00000364481 109 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.404-201ENST00000383978 102 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 SNORD12B-201ENST00000410433 91 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 RNA5SP247-201ENST00000411181 105 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
UBE2E3Q969T4 RPL17P19-201ENST00000489069 552 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 AC011352.1-201ENST00000512300 793 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 RNU6-63P-201ENST00000516690 95 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 AC136443.5-201ENST00000603741 370 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 FAM71BP1-201ENST00000604431 523 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.81□□□□□ -2.28
UBE2E3Q969T4 AC007014.2-201ENST00000615581 479 ntBASIC0.81□□□□□ -2.28
UBE2E3Q969T4 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RNU4-40P-201ENST00000364351 143 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 MTND1P34-201ENST00000438556 671 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RNU6-307P-201ENST00000516743 106 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.8□□□□□ -2.28
UBE2E3Q969T4 AC011712.1-201ENST00000588959 234 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 MIR1244-1-201ENST00000612829 85 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 MIR1244-3-201ENST00000635744 85 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 MIR1244-2-201ENST00000636449 85 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 MIR1244-4-202ENST00000636813 85 ntBASIC0.8□□□□□ -2.28
UBE2E3Q969T4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
UBE2E3Q969T4 RNU6-1301P-201ENST00000362724 104 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.88-201ENST00000363029 99 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 RNU6-163P-201ENST00000384396 106 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 MIR1287-201ENST00000408492 90 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 RNA5SP511-201ENST00000410487 115 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2E3Q969T4 POLR2J4-204ENST00000418424 324 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.79□□□□□ -2.28
UBE2E3Q969T4 ELOCP24-201ENST00000456370 334 ntBASIC0.79□□□□□ -2.28
UBE2E3Q969T4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms