Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 Y_RNA.632-201ENST00000459189 102 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 RNU6-911P-201ENST00000516523 104 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 RNU6-699P-201ENST00000517081 110 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.19□□□□□ -2.22
LHX4Q969G2 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.19□□□□□ -2.22
LHX4Q969G2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.19□□□□□ -2.22
LHX4Q969G2 SNORA28-201ENST00000606769 126 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 AC004467.1-201ENST00000615678 330 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 AC127459.3-201ENST00000624328 466 ntBASIC1.19□□□□□ -2.22
LHX4Q969G2 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 MIR562-201ENST00000384894 95 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 MIR628-201ENST00000385229 95 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 MIR660-201ENST00000385235 97 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 MTCO2P27-201ENST00000420740 428 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 AC093019.1-201ENST00000443135 252 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.18□□□□□ -2.22
LHX4Q969G2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 RNU6-1012P-201ENST00000516606 109 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 MIR548S-201ENST00000581352 82 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 AC084781.2-201ENST00000615568 161 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 SNORD3E-202ENST00000627253 216 ntBASIC1.18□□□□□ -2.22
LHX4Q969G2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
LHX4Q969G2 SNORA1B-201ENST00000362535 133 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 SNORA7.1-201ENST00000363750 139 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 Y_RNA.263-201ENST00000364659 114 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 Y_RNA.529-201ENST00000384586 119 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 RNU6-1009P-201ENST00000390996 107 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 RNU5A-5P-201ENST00000411054 116 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 MTND5P20-201ENST00000448677 143 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 CHEK2P4-201ENST00000450340 246 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 SNORD19B-201ENST00000459623 84 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 RPL39P38-201ENST00000467018 153 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 RNU2-56P-201ENST00000516826 190 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
LHX4Q969G2 AP002004.2-201ENST00000531656 154 ntBASIC1.17□□□□□ -2.22
LHX4Q969G2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LHX4Q969G2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LHX4Q969G2 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 Y_RNA.101-201ENST00000363154 102 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 RNU6-505P-201ENST00000384427 107 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 MIR520G-201ENST00000385064 90 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX4Q969G2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.16□□□□□ -2.22
LHX4Q969G2 AC096644.2-201ENST00000429278 159 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AC092991.1-201ENST00000477176 376 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 OR9P1P-201ENST00000496431 281 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 RNU6-507P-201ENST00000516045 100 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 RNA5SP61-201ENST00000516453 100 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 RNU7-28P-201ENST00000516759 62 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 Y_RNA.702-201ENST00000516843 96 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.16□□□□□ -2.22
LHX4Q969G2 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 CYP3A52P-201ENST00000563326 91 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AC011476.5-201ENST00000615594 130 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 AC240442.1-201ENST00000616055 283 ntBASIC1.16□□□□□ -2.22
LHX4Q969G2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LHX4Q969G2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 Y_RNA.27-201ENST00000362540 103 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 SNORA25.8-201ENST00000364831 128 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 RNU6-708P-201ENST00000384217 107 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 RNU6-424P-201ENST00000384367 105 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 RNU2-54P-201ENST00000410299 190 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 CALM2P4-201ENST00000430810 426 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
LHX4Q969G2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.15□□□□□ -2.23
LHX4Q969G2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 RNA5SP168-201ENST00000516642 112 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 RNU6-63P-201ENST00000516690 95 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 AC093027.1-201ENST00000546698 429 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 AC008269.2-201ENST00000561915 1105 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 MIR3664-201ENST00000579074 99 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 MIR4659A-201ENST00000580269 81 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 VN1R91P-201ENST00000594377 169 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 AC005176.2-201ENST00000596933 147 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 U6.92-201ENST00000636464 89 ntBASIC1.15□□□□□ -2.23
LHX4Q969G2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 RNU4-76P-201ENST00000364509 141 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 Y_RNA.356-201ENST00000365475 113 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 Y_RNA.428-201ENST00000384078 102 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 RNU6-20P-201ENST00000384106 107 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 RNY3P14-201ENST00000384309 102 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
LHX4Q969G2 AL031003.1-201ENST00000404229 172 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
LHX4Q969G2 AC092473.1-201ENST00000441098 221 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.14□□□□□ -2.23
LHX4Q969G2 SNORA70.12-201ENST00000516084 153 ntBASIC1.14□□□□□ -2.23
LHX4Q969G2 RNU6-1096P-201ENST00000517089 102 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 297.9 ms