Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3□□□□□ -1.93
BRF1Q92994 MIR548X2-201ENST00000579776 100 ntBASIC3□□□□□ -1.93
BRF1Q92994 AL355297.2-201ENST00000604792 129 ntBASIC3□□□□□ -1.93
BRF1Q92994 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
BRF1Q92994 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRF1Q92994 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRF1Q92994 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRF1Q92994 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
BRF1Q92994 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
BRF1Q92994 AL365361.1-201ENST00000566942 3481 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 AC062016.1-201ENST00000355719 319 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 MIR340-201ENST00000362125 95 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RNU1-22P-201ENST00000363334 158 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RNU6-818P-201ENST00000364837 108 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RNU6-643P-201ENST00000384018 107 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 MIR15B-201ENST00000385045 98 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RN7SKP101-201ENST00000411376 320 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 AC063976.3-201ENST00000426849 329 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.99□□□□□ -1.93
BRF1Q92994 RPS27P22-201ENST00000478056 241 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RPL23AP54-201ENST00000495129 419 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 SNORA4.4-201ENST00000515921 135 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 RNU6-63P-201ENST00000516690 95 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.99□□□□□ -1.93
BRF1Q92994 MIR548AI-201ENST00000579940 88 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 U2.20-201ENST00000613956 192 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 AL449363.1-201ENST00000617815 186 ntBASIC2.99□□□□□ -1.93
BRF1Q92994 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.99□□□□□ -1.93
BRF1Q92994 SNORA72-201ENST00000384339 132 ntBASIC2.98□□□□□ -1.93
BRF1Q92994 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.98□□□□□ -1.93
BRF1Q92994 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.98□□□□□ -1.93
BRF1Q92994 AC097462.1-201ENST00000514125 324 ntBASIC2.98□□□□□ -1.93
BRF1Q92994 MIR5092-201ENST00000583139 88 ntBASIC2.98□□□□□ -1.93
BRF1Q92994 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRF1Q92994 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
BRF1Q92994 SNORA25.6-201ENST00000364121 118 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 RNU6-743P-201ENST00000364151 106 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 RNU6-1117P-201ENST00000384525 104 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 Y_RNA.586-201ENST00000391146 98 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.97□□□□□ -1.93
BRF1Q92994 AC018868.1-201ENST00000491307 315 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
BRF1Q92994 RNU6-561P-201ENST00000516222 102 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 MIR4438-201ENST00000585271 93 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 AL021707.8-201ENST00000609428 183 ntBASIC2.97□□□□□ -1.93
BRF1Q92994 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
BRF1Q92994 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.96□□□□□ -1.93
BRF1Q92994 RNU4-13P-201ENST00000364019 141 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 RNU6-1081P-201ENST00000384537 107 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 RNU6-959P-201ENST00000384671 107 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 AL512604.1-201ENST00000404812 257 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 AC006461.1-201ENST00000412637 326 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 AL513477.1-202ENST00000417061 214 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 AL109933.2-201ENST00000452651 260 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 RNU6-426P-201ENST00000516464 97 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 MIR3117-201ENST00000584034 78 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 U6.73-201ENST00000619194 103 ntBASIC2.96□□□□□ -1.94
BRF1Q92994 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BRF1Q92994 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF1Q92994 DEFA7P-201ENST00000382676 285 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 RNU2-55P-201ENST00000411146 174 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 SRIP3-201ENST00000413200 219 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.95□□□□□ -1.94
BRF1Q92994 RNA5SP320-201ENST00000516263 124 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 RNU6-826P-201ENST00000516827 104 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 RNU7-172P-201ENST00000517125 64 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 NDUFA5P6-201ENST00000542110 379 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 AC004486.1-201ENST00000546846 233 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MIR3646-201ENST00000578301 84 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MIR3670-2-201ENST00000582974 65 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MIR3670-1-201ENST00000584160 65 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MIR3670-3-201ENST00000584855 65 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MIR3670-4-201ENST00000612260 65 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 U4atac.1-201ENST00000618345 95 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 AC091895.1-201ENST00000624494 256 ntBASIC2.95□□□□□ -1.94
BRF1Q92994 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF1Q92994 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF1Q92994 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
BRF1Q92994 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.94□□□□□ -1.94
BRF1Q92994 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF1Q92994 SNORA5B-201ENST00000363786 132 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 RNU1-96P-201ENST00000364163 162 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 RNU4-11P-201ENST00000365287 132 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF1Q92994 NDUFB4P4-201ENST00000404822 243 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 RNA5SP184-201ENST00000411071 108 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 AC060773.1-201ENST00000421698 310 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
BRF1Q92994 RNU6-1146P-201ENST00000516282 102 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF1Q92994 MIR3658-201ENST00000636291 56 ntBASIC2.94□□□□□ -1.94
BRF1Q92994 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF1Q92994 AC010332.2-201ENST00000613083 1904 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 RNU4-41P-201ENST00000364426 143 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 SNORA25B-201ENST00000365507 128 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 MIR196B-201ENST00000384852 84 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
BRF1Q92994 MIR513C-201ENST00000401352 84 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms