Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
ZNF561Q8N587 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.2□□□□□ -2.22
ZNF561Q8N587 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF561Q8N587 SNORD11B-201ENST00000607707 90 ntBASIC1.2□□□□□ -2.22
ZNF561Q8N587 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF561Q8N587 AC004467.1-201ENST00000615678 330 ntBASIC1.2□□□□□ -2.22
ZNF561Q8N587 MIR8062-201ENST00000621515 85 ntBASIC1.2□□□□□ -2.22
ZNF561Q8N587 Y_RNA.16-201ENST00000362421 102 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 Y_RNA.84-201ENST00000363011 104 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 Y_RNA.361-201ENST00000365515 120 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 Y_RNA.439-201ENST00000384119 94 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNU6-975P-201ENST00000384296 105 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 Y_RNA.518-201ENST00000384552 113 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 Y_RNA.541-201ENST00000384640 113 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC123900.1-201ENST00000420390 96 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC108667.1-201ENST00000428618 249 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AL731563.1-201ENST00000442202 214 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 UQCRBP2-201ENST00000447827 297 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AL137159.1-201ENST00000452808 512 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNU6-625P-201ENST00000459412 107 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNU7-57P-201ENST00000459540 60 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNU6-496P-201ENST00000516145 99 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNY3P15-201ENST00000516297 97 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNA5SP490-201ENST00000517141 136 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 RNU2-12P-201ENST00000517216 168 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AP003733.2-201ENST00000529409 171 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF561Q8N587 RPL17P51-201ENST00000605218 238 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AC022441.3-201ENST00000605737 136 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 AP001282.2-201ENST00000616149 309 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 LINC02555-201ENST00000563933 1951 ntBASIC1.19□□□□□ -2.22
ZNF561Q8N587 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.144-201ENST00000363521 113 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 U3.8-201ENST00000363675 217 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 RNU6-457P-201ENST00000363999 107 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.462-201ENST00000384268 102 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 RNU6-463P-201ENST00000384340 107 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 SNORD14D-201ENST00000384390 87 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 RNU6-505P-201ENST00000384427 107 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.498-201ENST00000384460 102 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.526-201ENST00000384572 110 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 SNORA17.3-201ENST00000391159 129 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AL355796.1-201ENST00000406706 323 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC060773.1-201ENST00000421698 310 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 NDUFB4P10-201ENST00000452541 359 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.668-201ENST00000516233 93 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.680-201ENST00000516441 93 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF561Q8N587 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC005828.6-201ENST00000606610 232 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 Y_RNA.772-201ENST00000606692 102 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC130454.1-201ENST00000622948 401 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC127459.3-201ENST00000624328 466 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.18□□□□□ -2.22
ZNF561Q8N587 MIR3674-201ENST00000636576 68 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 AC068700.1-201ENST00000565862 3754 ntBASIC1.18□□□□□ -2.22
ZNF561Q8N587 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 SNORD113-8-201ENST00000363497 74 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 Y_RNA.172-201ENST00000363765 102 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 SNORD115-30-201ENST00000364117 82 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 Y_RNA.243-201ENST00000364481 109 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU6-1175P-201ENST00000365200 107 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU6-1264P-201ENST00000383891 107 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 Y_RNA.418-201ENST00000384029 102 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 Y_RNA.581-201ENST00000391017 97 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 AL117342.1-201ENST00000404861 406 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 MIR1283-2-201ENST00000408621 87 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU6-1203P-201ENST00000410703 110 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 AC139712.2-201ENST00000424302 339 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU6-221P-201ENST00000459541 99 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU6-436P-201ENST00000516171 114 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 AC025647.1-201ENST00000517879 253 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 CYCSP23-201ENST00000519781 313 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 AL512598.1-201ENST00000610158 273 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 MIR376A1-201ENST00000616574 68 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 U6.115-201ENST00000636045 103 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF561Q8N587 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ZNF561Q8N587 ZNF209P-201ENST00000593450 2304 ntBASIC1.17□□□□□ -2.22
ZNF561Q8N587 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZNF561Q8N587 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF561Q8N587 MIR378A-201ENST00000362177 66 ntBASIC1.16□□□□□ -2.22
ZNF561Q8N587 RNU6-661P-201ENST00000362409 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 179.8 ms