Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 RNU6-1099P-201ENST00000363533 107 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 FO393413.1-201ENST00000402892 195 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 SNORA11.1-201ENST00000408133 129 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 MICF-203ENST00000432679 129 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 RNU7-61P-201ENST00000515897 61 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 SCARNA3-201ENST00000517097 143 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 MIR4778-201ENST00000577635 80 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 MIR3199-1-201ENST00000582434 88 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 FAM71BP1-201ENST00000604431 523 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 AC091932.4-201ENST00000623386 200 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 MIR7157-201ENST00000635801 60 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
CCDC116Q8IYX3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 Y_RNA.10-201ENST00000362371 110 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RNU6-1084P-201ENST00000362498 107 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RNY1P1-201ENST00000364372 112 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RNU4-16P-201ENST00000364737 141 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 SNORA14A-201ENST00000364773 135 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 MIR1255A-201ENST00000408338 113 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RPS29P7-201ENST00000439662 171 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RNU7-80P-201ENST00000459562 61 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 AC113410.1-201ENST00000505029 247 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 RNU2-13P-201ENST00000515909 113 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 AP003484.1-201ENST00000530974 250 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 AC002984.1-201ENST00000591692 448 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 HSPE1P19-201ENST00000603327 295 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
CCDC116Q8IYX3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 snoU2-30.1-201ENST00000365012 70 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.531-201ENST00000384589 121 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RNU6-813P-201ENST00000384691 107 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RNA5SP424-201ENST00000390988 115 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RNA5SP323-201ENST00000391094 133 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RNU6-972P-201ENST00000391208 107 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 SNORA11.2-201ENST00000408318 127 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 AL353689.1-201ENST00000438895 199 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RN7SL93P-201ENST00000463035 293 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 CKS1BP2-201ENST00000497342 240 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 RNA5SP395-201ENST00000516567 118 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 AC022254.1-201ENST00000567857 235 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 MIR4762-201ENST00000585261 75 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 IGLL4P-201ENST00000614590 133 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC116Q8IYX3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 RNU6-525P-201ENST00000363685 104 ntBASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.454-201ENST00000384224 113 ntBASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 MIR95-201ENST00000385072 81 ntBASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 RNU2-48P-201ENST00000410694 191 ntBASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 AL353149.1-201ENST00000610667 244 ntBASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC116Q8IYX3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RNA5SP387-201ENST00000364226 106 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 U8.5-201ENST00000364528 136 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RNA5SP171-201ENST00000391071 115 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RNU6-644P-201ENST00000391155 98 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RPL21P3-201ENST00000395517 478 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RPL39P39-201ENST00000455840 151 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 CYP2C59P-201ENST00000457790 269 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RNU7-94P-201ENST00000459576 63 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 AC008011.1-201ENST00000545989 227 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 MIR5685-201ENST00000579080 79 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 U7.3-201ENST00000616123 62 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 AC087741.2-201ENST00000619415 172 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 MIR7515-201ENST00000637837 67 ntBASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC116Q8IYX3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 RNU1-18P-201ENST00000363062 164 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 SNORA62.3-201ENST00000365110 153 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms