Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCUBE3Q8IX30 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SCUBE3Q8IX30 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.9□□□□□ -1.78
SCUBE3Q8IX30 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCUBE3Q8IX30 RNU6-363P-201ENST00000362895 105 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 SNORD14E-201ENST00000364009 85 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 RNU6-546P-201ENST00000383991 107 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 RNU6-409P-201ENST00000384114 104 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 MIR577-201ENST00000385196 96 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 RNU6-733P-201ENST00000410759 104 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 SNRPGP3-201ENST00000469405 227 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 MIR3618-201ENST00000580330 88 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 MIR4513-201ENST00000581077 86 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 AC005000.2-201ENST00000605468 310 ntBASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.9□□□□□ -1.79
SCUBE3Q8IX30 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 RNU6-661P-201ENST00000362409 107 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 snoU2-30.2-201ENST00000362805 70 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.96-201ENST00000363092 109 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 RNU6-268P-201ENST00000364174 107 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 SNORA14A-201ENST00000364773 135 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.313-201ENST00000365095 103 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.332-201ENST00000365271 113 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.360-201ENST00000365512 102 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 MRPL35P3-201ENST00000421557 364 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 AC009969.1-201ENST00000438726 172 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 RNU6-857P-201ENST00000515893 110 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 AP003484.1-201ENST00000530974 250 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 AL360157.1-201ENST00000565962 87 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 U3.45-201ENST00000607547 219 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 MIR486-1-201ENST00000612171 68 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 SCARNA15.3-201ENST00000626315 122 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 SCARNA4.1-201ENST00000628597 123 ntBASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.89□□□□□ -1.79
SCUBE3Q8IX30 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 RNU6-1084P-201ENST00000362498 107 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 SNORA18-201ENST00000384416 132 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 MIR218-2-201ENST00000385006 110 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 RNA5SP467-201ENST00000391274 118 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 RNU6-402P-201ENST00000410678 103 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 RNU2-11P-201ENST00000459191 187 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 RNU7-171P-201ENST00000459581 62 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 HSPE1P19-201ENST00000603327 295 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 AC091932.4-201ENST00000623386 200 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 U6.105-201ENST00000637379 88 ntBASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCUBE3Q8IX30 SNORD115-19-201ENST00000363098 82 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 SNORD115-18-201ENST00000363293 82 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.190-201ENST00000363964 101 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RNU6-743P-201ENST00000364151 106 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 SNORD115-17-201ENST00000364612 82 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RNA5SP51-201ENST00000364750 119 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RNU6-60P-201ENST00000364792 103 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 Y_RNA.437-201ENST00000384113 113 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RNU6-24P-201ENST00000384440 107 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RPS29P4-201ENST00000414733 161 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 AC017083.1-201ENST00000428093 483 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 SNRPGP14-201ENST00000435400 219 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 AC087499.4-201ENST00000448505 178 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 AL031183.1-201ENST00000457667 207 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 PHBP14-201ENST00000512887 367 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 AP002004.2-201ENST00000531656 154 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 MIR7975-201ENST00000619350 68 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 MIR203B-201ENST00000636080 86 ntBASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.87□□□□□ -1.79
SCUBE3Q8IX30 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 RPL21P3-201ENST00000395517 478 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 AL035423.1-201ENST00000420331 213 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 SNORA31.1-201ENST00000515993 133 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 SNORA31.5-201ENST00000516190 133 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 RNU1-142P-201ENST00000516682 145 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 AC019288.1-201ENST00000557918 224 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 MIR548Z-201ENST00000584743 97 ntBASIC3.86□□□□□ -1.79
SCUBE3Q8IX30 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms