Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 MIR410-201ENST00000362222 80 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 MIR873-201ENST00000401120 77 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNA5SP475-201ENST00000410568 110 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-321P-201ENST00000410912 106 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 MTND3P8-201ENST00000412909 339 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-120P-201ENST00000516077 103 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 Y_RNA.708-201ENST00000516950 96 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 RNU6-1213P-201ENST00000517075 94 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 AC005828.6-201ENST00000606610 232 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 AC106800.4-201ENST00000614905 153 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 AC007014.2-201ENST00000615581 479 ntBASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC50Q8IVM0 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 RNU6-510P-201ENST00000391239 108 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 MIR1277-201ENST00000408536 78 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 RNA5SP511-201ENST00000410487 115 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 PIGPP3-201ENST00000425307 415 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 RPEP5-201ENST00000441137 268 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AF235103.2-201ENST00000525753 346 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AC055872.1-201ENST00000570978 278 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AC084782.3-201ENST00000612282 578 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 AC002553.4-201ENST00000616896 331 ntBASIC0.84□□□□□ -2.27
CCDC50Q8IVM0 Y_RNA.88-201ENST00000363029 99 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 RNU4-40P-201ENST00000364351 143 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 SNORA75.2-201ENST00000391138 150 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 SNORA75.3-201ENST00000391231 150 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 SNORD12B-201ENST00000410433 91 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 MIR3684-201ENST00000579779 74 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 MIR3192-201ENST00000584920 77 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 AL008636.1-201ENST00000625038 1018 ntBASIC0.83□□□□□ -2.28
CCDC50Q8IVM0 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU6-1301P-201ENST00000362724 104 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 Y_RNA.243-201ENST00000364481 109 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 SNORA80D-201ENST00000384488 135 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 MIR562-201ENST00000384894 95 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AL354751.2-201ENST00000415471 210 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 UBE2V1P7-201ENST00000446395 340 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RPS4XP11-201ENST00000446897 772 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AC107399.1-201ENST00000451226 265 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU6-408P-201ENST00000515910 100 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AC023442.1-201ENST00000531247 422 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AL357312.1-201ENST00000603879 298 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 BNIP3P10-201ENST00000605360 577 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 AC092794.2-201ENST00000620933 563 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 MIR6767-201ENST00000637302 66 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
CCDC50Q8IVM0 RNU6-961P-201ENST00000363893 105 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 RNU6-593P-201ENST00000364716 112 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 Y_RNA.482-201ENST00000384377 111 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 MIR520G-201ENST00000385064 90 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 SNORA75.4-201ENST00000391278 119 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 RNU4-14P-201ENST00000410858 122 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 RPL23AP50-201ENST00000434149 455 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 LINC01399-202ENST00000458450 244 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 RNU6-113P-201ENST00000516653 101 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 MIR3124-201ENST00000582636 67 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AC004832.4-201ENST00000608952 331 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 AC073869.6-201ENST00000640656 341 ntBASIC0.81□□□□□ -2.28
CCDC50Q8IVM0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms