Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 MIR302B-201ENST00000362188 73 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.78-201ENST00000362970 110 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 SNORA63D-201ENST00000364359 132 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 SNORD31B-201ENST00000364977 69 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 AC097463.2-201ENST00000421074 142 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 RN7SKP57-201ENST00000517248 293 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 Z83843.1-201ENST00000604070 3685 ntBASIC2.97□□□□□ -1.93
ATG4DQ86TL0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
ATG4DQ86TL0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.17-201ENST00000362433 111 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 MIR1255A-201ENST00000408338 113 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 RNU6-893P-201ENST00000458841 100 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 AP002884.2-201ENST00000471647 395 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 RPS29P21-201ENST00000496272 170 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 SNORA64.4-201ENST00000516632 81 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 AC068657.1-201ENST00000520807 306 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 MIR7153-201ENST00000637758 57 ntBASIC2.96□□□□□ -1.94
ATG4DQ86TL0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 SNORD56.3-201ENST00000363507 71 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-690P-201ENST00000365242 106 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 SNORD24-201ENST00000383884 75 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.466-201ENST00000384294 113 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-813P-201ENST00000384691 107 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 MIR759-201ENST00000390224 91 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-498P-201ENST00000459468 107 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RPS26P48-201ENST00000491713 339 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU1-61P-201ENST00000516107 151 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU1-143P-201ENST00000516296 146 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU6-65P-201ENST00000516332 98 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 SUMO2P16-201ENST00000519475 264 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG4DQ86TL0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4DQ86TL0 U1.23-201ENST00000610293 146 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 RNU1-68P-201ENST00000615382 146 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 MIR6076-201ENST00000617521 113 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 U1.39-201ENST00000621562 146 ntBASIC2.95□□□□□ -1.94
ATG4DQ86TL0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4DQ86TL0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATG4DQ86TL0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 RNA5SP383-201ENST00000362934 120 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 SNRPGP10-201ENST00000432323 225 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 HMGN2P16-201ENST00000456802 261 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 RNA5SP57-201ENST00000459463 123 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 RN7SL504P-201ENST00000494496 287 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 uc_338.14-201ENST00000613162 166 ntBASIC2.94□□□□□ -1.94
ATG4DQ86TL0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4DQ86TL0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 RNU6-805P-201ENST00000365643 106 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 MIR518F-201ENST00000384973 87 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 SNRPGP13-201ENST00000442212 177 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC233266.1-201ENST00000454518 96 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC022137.1-201ENST00000483735 151 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC022523.2-201ENST00000561045 150 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 MIR5197-201ENST00000583721 112 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC008507.4-201ENST00000585464 127 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC022217.4-201ENST00000604389 163 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 FAM71BP1-201ENST00000604431 523 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC021443.1-201ENST00000604478 211 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC242852.1-201ENST00000612151 96 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC002076.2-201ENST00000617362 122 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC244015.1-201ENST00000622301 99 ntBASIC2.93□□□□□ -1.94
ATG4DQ86TL0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4DQ86TL0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.92□□□□□ -1.94
ATG4DQ86TL0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ATG4DQ86TL0 RNU6-525P-201ENST00000363685 104 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.221-201ENST00000364248 96 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 Y_RNA.298-201ENST00000364960 107 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 RNU6-438P-201ENST00000365561 103 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 MIR128-1-201ENST00000384921 82 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 MIR548D2-201ENST00000384955 97 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.92□□□□□ -1.94
ATG4DQ86TL0 RPL39P25-201ENST00000449384 154 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 206.1 ms