Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RNU1-131P-201ENST00000458943 161 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RNU7-94P-201ENST00000459576 63 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 NDUFA4P2-201ENST00000489989 244 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RN7SL504P-201ENST00000494496 287 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 RN7SKP19-201ENST00000516016 252 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 YPEL5P2-201ENST00000605553 359 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UBE3DQ7Z6J8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RNU6-888P-201ENST00000363010 101 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RNA5SP387-201ENST00000364226 106 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 Y_RNA.253-201ENST00000364562 112 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 SNORD116-21-201ENST00000384507 92 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RNU6-880P-201ENST00000384526 107 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RNU4-47P-201ENST00000410876 114 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 SNRPGP10-201ENST00000432323 225 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 AC244505.4-201ENST00000434905 287 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 SSXP5-201ENST00000443473 287 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RN7SL636P-201ENST00000497504 294 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 MRPS17P9-201ENST00000511924 393 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 RNU7-128P-201ENST00000517247 62 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 UBL5P2-201ENST00000583788 219 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 AC008507.4-201ENST00000585464 127 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 AL355297.2-201ENST00000604792 129 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 AL022345.2-201ENST00000606307 135 ntBASIC2.98□□□□□ -1.93
UBE3DQ7Z6J8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 RNU6-309P-201ENST00000364573 106 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 SNORA22-201ENST00000383907 134 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 RNU6-1186P-201ENST00000410429 97 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC003685.2-201ENST00000422795 395 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC068657.1-201ENST00000520807 306 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC024995.1-201ENST00000523014 93 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 MIR3613-201ENST00000579844 87 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AC108081.1-201ENST00000604358 221 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 AL121890.5-201ENST00000620848 304 ntBASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.97□□□□□ -1.93
UBE3DQ7Z6J8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
UBE3DQ7Z6J8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 Y_RNA.309-201ENST00000365046 111 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 SNORA26.7-201ENST00000391288 122 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 Y_RNA.630-201ENST00000411370 108 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 BX510359.1-201ENST00000456973 237 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 RN7SL807P-201ENST00000470923 297 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 MIR5004-201ENST00000579078 107 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 AL449363.1-201ENST00000617815 186 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 MIR6079-201ENST00000635807 62 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 MIR338-201ENST00000636369 67 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 MAPK10-362ENST00000641864 4484 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 AC093908.1-201ENST00000623125 8092 ntBASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
UBE3DQ7Z6J8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 Y_RNA.43-201ENST00000362670 111 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 MIR592-201ENST00000384959 97 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AL021397.1-201ENST00000451806 248 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 RNA5SP236-201ENST00000516169 116 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 RNU1-142P-201ENST00000516682 145 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 MIR4679-2-201ENST00000578358 77 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AC025166.1-201ENST00000612411 163 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 AL391516.1-201ENST00000554380 2449 ntBASIC2.95□□□□□ -1.94
UBE3DQ7Z6J8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 MIR148B-201ENST00000362252 99 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 MIR208A-201ENST00000362287 71 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 SNORA54-201ENST00000384281 123 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 SNORD15B-201ENST00000384714 146 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 SNORD67-201ENST00000390833 111 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 Y_RNA.651-201ENST00000459380 103 ntBASIC2.94□□□□□ -1.94
UBE3DQ7Z6J8 RNU6-667P-201ENST00000517186 102 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 199.5 ms