Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU1-58P-201ENST00000362413 163 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.144-201ENST00000363521 113 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 Y_RNA.327-201ENST00000365201 102 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 SNORA6-201ENST00000384033 151 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-42P-201ENST00000384165 107 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC004965.1-201ENST00000413033 213 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 RPL21P38-201ENST00000418090 167 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC060773.1-201ENST00000421698 310 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 HMGN2P34-201ENST00000437647 269 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC098869.1-201ENST00000481627 292 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-496P-201ENST00000516145 99 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC027419.1-201ENST00000522976 328 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 AC008749.1-201ENST00000597650 306 ntBASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.34□□□□□ -2.03
KRT28Q7Z3Y7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.34□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-463P-201ENST00000384340 107 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 AC096920.1-201ENST00000423991 241 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 AC011406.1-201ENST00000512440 370 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-570P-201ENST00000517051 105 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 SUMO2P18-201ENST00000518873 252 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 U6.115-201ENST00000636045 103 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 U6.104-201ENST00000637979 90 ntBASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
KRT28Q7Z3Y7 AL391987.6-201ENST00000305671 199 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 RNU4-90P-201ENST00000362773 141 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 MIR518A2-201ENST00000384966 87 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 HMGN2P39-201ENST00000398005 273 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 MIR1302-6-201ENST00000408466 90 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 AC016909.1-201ENST00000415916 166 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 RPL23AP3-201ENST00000453844 468 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 HSPE1P25-201ENST00000455484 251 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 SNORD65B-201ENST00000459126 73 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 HMGB3P17-201ENST00000504195 649 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 AC010598.1-201ENST00000510378 103 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 CBX3P4-201ENST00000538909 354 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.32□□□□□ -2.04
KRT28Q7Z3Y7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 SNORD81.1-201ENST00000363064 77 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-392P-201ENST00000364926 101 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 MIR215-201ENST00000384858 110 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 U3.40-201ENST00000408706 208 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 POLR2KP2-201ENST00000438155 177 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 SUMO1P2-201ENST00000452524 304 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 AC009127.3-201ENST00000570531 403 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 MIR4503-201ENST00000582187 83 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 7SK.10-201ENST00000621414 298 ntBASIC2.31□□□□□ -2.04
KRT28Q7Z3Y7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 SNORD114-7-201ENST00000362520 77 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.84-201ENST00000363011 104 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 RNU1-42P-201ENST00000364033 160 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 SNORD115-30-201ENST00000364117 82 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.452-201ENST00000384202 108 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 SNORA20B-201ENST00000384220 132 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-196P-201ENST00000384315 107 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-102P-201ENST00000384485 104 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 MIR3169-201ENST00000578032 83 ntBASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
KRT28Q7Z3Y7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-60P-201ENST00000364792 103 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-407P-201ENST00000365280 104 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.461-201ENST00000384263 103 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 Y_RNA.556-201ENST00000384677 113 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-417P-201ENST00000384712 107 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 MIR597-201ENST00000384968 97 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 MT-TW-201ENST00000387382 68 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-1203P-201ENST00000410703 110 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 AL353689.1-201ENST00000438895 199 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RPS27P22-201ENST00000478056 241 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 AP001282.2-201ENST00000616149 309 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 RMST_2.1-201ENST00000617263 136 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 MIR6779-201ENST00000617283 64 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.29□□□□□ -2.04
KRT28Q7Z3Y7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms