Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC123900.1-201ENST00000420390 96 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 SUMO1P4-201ENST00000429430 302 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AL357134.1-201ENST00000445848 426 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RPL23AP7-203ENST00000449021 469 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 RNU7-120P-201ENST00000459334 63 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AC010598.1-201ENST00000510378 103 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AP005660.1-201ENST00000522972 293 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.58□□□□□ -2
UBE3BQ7Z3V4 U4atac.1-201ENST00000618345 95 ntBASIC2.58□□□□□ -2
UBE3BQ7Z3V4 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBE3BQ7Z3V4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UBE3BQ7Z3V4 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 SNORD14D-201ENST00000384390 87 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 RNU6-763P-201ENST00000390865 106 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.57□□□□□ -2
UBE3BQ7Z3V4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.57□□□□□ -2
UBE3BQ7Z3V4 AC025754.2-201ENST00000606491 432 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 AC006435.5-201ENST00000624486 112 ntBASIC2.57□□□□□ -2
UBE3BQ7Z3V4 MIR340-201ENST00000362125 95 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 RNU6-271P-201ENST00000363858 105 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 AC008134.1-201ENST00000420943 193 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 BTF3P11-201ENST00000426582 477 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 AC104435.1-201ENST00000483483 166 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 AC024405.2-202ENST00000532731 184 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 MIR5692C2-201ENST00000577959 77 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.56□□□□□ -2
UBE3BQ7Z3V4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
UBE3BQ7Z3V4 AC092881.1-201ENST00000638218 2733 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.56□□□□□ -2
UBE3BQ7Z3V4 RNU6-653P-201ENST00000363074 106 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 RNU6-743P-201ENST00000364151 106 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.262-201ENST00000364641 102 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 SNORA72.4-201ENST00000384174 132 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 RNU4-70P-201ENST00000384579 139 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 SNORA26.5-201ENST00000391215 123 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.55□□□□□ -2
UBE3BQ7Z3V4 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 AC087441.2-201ENST00000529141 262 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
UBE3BQ7Z3V4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.55□□□□□ -2
UBE3BQ7Z3V4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.55□□□□□ -2
UBE3BQ7Z3V4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 AL365265.1-201ENST00000621045 234 ntBASIC2.55□□□□□ -2
UBE3BQ7Z3V4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.180-201ENST00000363867 113 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.435-201ENST00000384095 112 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RNU6-918P-201ENST00000391219 106 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RNU6-855P-201ENST00000410395 104 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 SRIP3-201ENST00000413200 219 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 U8.19-201ENST00000459095 133 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RPS26P55-201ENST00000471178 356 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RNU6-991P-201ENST00000516168 107 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 RNU6-856P-201ENST00000516959 98 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 AP002392.1-201ENST00000537692 208 ntBASIC2.54□□□□□ -2
UBE3BQ7Z3V4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.54□□□□□ -2
UBE3BQ7Z3V4 MIRLET7G-201ENST00000362280 84 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 RNA5SP432-201ENST00000362480 116 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 RNU6-47P-201ENST00000383866 107 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 RNU6-886P-201ENST00000384319 105 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 PCNPP3-201ENST00000393579 471 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 AL591806.2-201ENST00000433122 173 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 AC107393.1-201ENST00000512403 346 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 AC072026.1-201ENST00000605023 201 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 AC013791.1-201ENST00000616619 62 ntBASIC2.53□□□□□ -2
UBE3BQ7Z3V4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 AL355497.1-201ENST00000406262 551 ntBASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 RPL36AP21-201ENST00000490372 323 ntBASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBE3BQ7Z3V4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 277.6 ms