Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MIR548I3-201ENST00000408378 149 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 MIR548I1-201ENST00000408810 149 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 AL135790.2-201ENST00000437701 267 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 RNU7-120P-201ENST00000459334 63 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 AC107393.1-201ENST00000512403 346 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 RNU6-856P-201ENST00000516959 98 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 MIR4498-201ENST00000577599 66 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 AC072026.1-201ENST00000605023 201 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 AC068647.2-201ENST00000637380 353 ntBASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
OTOP1Q7RTM1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 RNU4-70P-201ENST00000384579 139 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 EDDM3CP-201ENST00000415977 425 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 HMGN2P34-201ENST00000437647 269 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 AC245102.2-201ENST00000448956 180 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 RPS20P10-201ENST00000451209 253 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 RNU7-26P-201ENST00000458980 63 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 HMGB3P3-201ENST00000510526 400 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 AC108729.3-201ENST00000513484 108 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 AL137100.2-201ENST00000555786 315 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 AC026271.5-201ENST00000577873 130 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 CENPCP1-201ENST00000533085 2578 ntBASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
OTOP1Q7RTM1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU4-13P-201ENST00000364019 141 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU6-47P-201ENST00000383866 107 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU6-160P-201ENST00000384591 107 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 AC016909.1-201ENST00000415916 166 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 COX6CP10-201ENST00000416832 224 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU7-141P-201ENST00000459304 62 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU6-1278P-201ENST00000516130 107 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 AC087441.2-201ENST00000529141 262 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 MIR4438-201ENST00000585271 93 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
OTOP1Q7RTM1 RNU4-17P-201ENST00000365598 141 ntBASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 CR769767.1-201ENST00000436337 346 ntBASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 MIR1291-201ENST00000627649 87 ntBASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 AC016717.2-201ENST00000609089 5141 ntBASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
OTOP1Q7RTM1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 SNORA64-201ENST00000384674 134 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 SNORA8.3-201ENST00000384679 139 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 AL355497.1-201ENST00000406262 551 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 AC104332.1-201ENST00000440471 797 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 MIR3126-201ENST00000577443 74 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 MIR4781-201ENST00000585250 76 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 AC005972.2-201ENST00000604690 348 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 MIR548AY-201ENST00000617669 107 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
OTOP1Q7RTM1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU6-653P-201ENST00000363074 106 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.172-201ENST00000363765 102 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.233-201ENST00000364407 101 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 SNORD116-13-201ENST00000384408 92 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU6-443P-201ENST00000384780 107 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 AC117454.1-201ENST00000491120 168 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 AC026436.1-201ENST00000510537 270 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 AC011406.1-201ENST00000512440 370 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.662-201ENST00000516028 97 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU6-63P-201ENST00000516690 95 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU6-861P-201ENST00000516745 106 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU7-116P-201ENST00000516940 62 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RNU7-172P-201ENST00000517125 64 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 AC022559.1-201ENST00000520905 205 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 POLR3GP1-201ENST00000594073 261 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 Y_RNA.802-201ENST00000614892 130 ntBASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
OTOP1Q7RTM1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 RNU6-144P-201ENST00000383951 107 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 RNU6-376P-201ENST00000384731 106 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 RNU6-918P-201ENST00000391219 106 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 AC060773.1-201ENST00000421698 310 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 RNU6-295P-201ENST00000516901 104 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 AC004832.4-201ENST00000608952 331 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 U2.15-201ENST00000611544 191 ntBASIC2.71□□□□□ -1.98
OTOP1Q7RTM1 U2.16-201ENST00000613119 191 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms