Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MTND2P29-201ENST00000438595 412 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 RPL39P38-201ENST00000467018 153 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SHFQ7M4L6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHFQ7M4L6 UBE2WP1-201ENST00000362030 340 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 RNU6-662P-201ENST00000384253 104 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 MIR515-2-201ENST00000384883 83 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 MIR515-1-201ENST00000384884 83 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SHFQ7M4L6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 RPS20P10-201ENST00000451209 253 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 SNORA27.4-201ENST00000516650 95 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 RNU1-142P-201ENST00000516682 145 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 AC073413.2-201ENST00000604332 360 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 AC004832.4-201ENST00000608952 331 ntBASIC1.86□□□□□ -2.11
SHFQ7M4L6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.86□□□□□ -2.11
SHFQ7M4L6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
SHFQ7M4L6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHFQ7M4L6 RNU6-801P-201ENST00000364087 105 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.401-201ENST00000383965 117 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.447-201ENST00000384184 113 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.477-201ENST00000384352 108 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 RNA5SP323-201ENST00000391094 133 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AL603910.2-201ENST00000407268 136 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 RNA5SP511-201ENST00000410487 115 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 RNU4-53P-201ENST00000410828 140 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AC245047.4-201ENST00000433189 144 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 RPS26P45-201ENST00000471748 340 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 TRBV12-1-201ENST00000479785 344 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AC024995.1-201ENST00000523014 93 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
SHFQ7M4L6 MIR3128-201ENST00000581957 66 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AL512605.2-201ENST00000592972 256 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 AC069114.2-201ENST00000604699 304 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.85□□□□□ -2.11
SHFQ7M4L6 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SHFQ7M4L6 AP006437.1-201ENST00000641440 3685 ntBASIC1.85□□□□□ -2.11
SHFQ7M4L6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SHFQ7M4L6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 OOSP1P1-201ENST00000423265 274 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AC010154.1-201ENST00000425857 269 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AC136628.3-201ENST00000521868 290 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AC084364.2-201ENST00000546924 395 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AC015720.1-201ENST00000565251 277 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 SUB1P4-201ENST00000566062 339 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 MIR4643-201ENST00000577473 78 ntBASIC1.84□□□□□ -2.11
SHFQ7M4L6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.84□□□□□ -2.11
SHFQ7M4L6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SHFQ7M4L6 Y_RNA.60-201ENST00000362831 98 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-740P-201ENST00000364734 105 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-136P-201ENST00000384663 107 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-376P-201ENST00000384731 106 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-763P-201ENST00000390865 106 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 SNORA26.5-201ENST00000391215 123 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 MIR548H3-201ENST00000408771 118 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU6-651P-201ENST00000411040 105 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RNU2-14P-201ENST00000411053 191 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
SHFQ7M4L6 AL162725.1-201ENST00000435405 301 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.83□□□□□ -2.12
SHFQ7M4L6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RPL36AP21-201ENST00000490372 323 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 Y_RNA.673-201ENST00000516306 88 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.83□□□□□ -2.12
SHFQ7M4L6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SHFQ7M4L6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.82□□□□□ -2.12
SHFQ7M4L6 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 RNU6-1272P-201ENST00000362776 107 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 SNORA72.4-201ENST00000384174 132 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 Y_RNA.618-201ENST00000410949 107 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 AL356320.1-201ENST00000429616 163 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 AL606517.2-201ENST00000442855 241 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 AC091021.1-201ENST00000468051 388 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.82□□□□□ -2.12
SHFQ7M4L6 AC091178.2-201ENST00000584401 117 ntBASIC1.82□□□□□ -2.12
SHFQ7M4L6 Y_RNA.783-201ENST00000613546 102 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 351.5 ms