Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 RNU6-1189P-201ENST00000383958 107 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 MIR218-2-201ENST00000385006 110 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 RNU6-70P-201ENST00000516438 60 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 AC004812.1-201ENST00000540773 146 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 MIR5195-201ENST00000583555 115 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 AL512310.12-203ENST00000640543 90 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
TRAF7Q6Q0C0 RNU6-1313P-201ENST00000362622 102 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 Y_RNA.247-201ENST00000364500 92 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 MIR1283-1-201ENST00000408494 87 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 MIR1294-201ENST00000408503 142 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AC079150.2-201ENST00000443733 78 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AL031183.1-201ENST00000457667 207 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 RNU7-14P-201ENST00000459331 62 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 RNU7-57P-201ENST00000459540 60 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 RNA5SP112-201ENST00000515937 99 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AC103810.1-201ENST00000579873 453 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 MIR4765-201ENST00000585007 77 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AL137849.1-201ENST00000604767 169 ntBASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF7Q6Q0C0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 SNORD9-201ENST00000362566 104 ntBASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 RNA5SP295-201ENST00000362655 121 ntBASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 SPINT5P-201ENST00000448174 155 ntBASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 RNA5SP208-201ENST00000516156 78 ntBASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRAF7Q6Q0C0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TRAF7Q6Q0C0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
TRAF7Q6Q0C0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 RNU4-16P-201ENST00000364737 141 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 SNORD14D-201ENST00000384390 87 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 SNORD105B-201ENST00000458770 79 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 MIR3117-201ENST00000584034 78 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 MIR3651-201ENST00000630427 90 ntBASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRAF7Q6Q0C0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 SNORA1.1-201ENST00000364671 133 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 HMGN2P8-201ENST00000391458 268 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 RNU6-1077P-201ENST00000410506 102 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 RNU6-1190P-201ENST00000410811 104 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 Z92545.1-201ENST00000411782 234 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 AC115115.1-201ENST00000449927 248 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 CYCSP35-201ENST00000451978 304 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 AC108729.3-201ENST00000513484 108 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 RNU6-557P-201ENST00000516842 110 ntBASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRAF7Q6Q0C0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 RNU6-686P-201ENST00000364839 107 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 Y_RNA.440-201ENST00000384120 114 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 MIR633-201ENST00000384821 98 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 BX510359.1-201ENST00000456973 237 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SCARNA13-201ENST00000516672 275 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 AC020914.4-201ENST00000597690 277 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 AC005520.4-201ENST00000604337 90 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SEPT14P17-201ENST00000617978 177 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 MIR664A-201ENST00000626086 82 ntBASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.06□□□□□ -1.76
TRAF7Q6Q0C0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms