Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 MIRLET7C-201ENST00000362160 84 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 RNU6-454P-201ENST00000364292 107 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 RNU6-117P-201ENST00000365415 107 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 RNU6-601P-201ENST00000384540 107 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 MIR520G-201ENST00000385064 90 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 MTND3P8-201ENST00000412909 339 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 SUMO1P2-201ENST00000452524 304 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 SNORA40.9-201ENST00000515895 93 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 SNORD79.1-201ENST00000516069 84 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 AC022868.1-201ENST00000517767 391 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 FAM106DP-201ENST00000586416 501 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 AL117336.2-201ENST00000602435 335 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 AC009229.3-201ENST00000608056 282 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 MIR3674-201ENST00000636576 68 ntBASIC0.82□□□□□ -2.28
TRIM40Q6P9F5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 MIR373-201ENST00000362273 69 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.124-201ENST00000363339 93 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.339-201ENST00000365325 102 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.358-201ENST00000365491 99 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 RNU6-318P-201ENST00000384283 103 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 RNA5SP475-201ENST00000410568 110 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AC107399.1-201ENST00000451226 265 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 RPL39P39-201ENST00000455840 151 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AF235103.2-201ENST00000525753 346 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AL358944.1-201ENST00000528537 144 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 AC002553.4-201ENST00000616896 331 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRIM40Q6P9F5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.6-201ENST00000362350 114 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 SNORD114-7-201ENST00000362520 77 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.482-201ENST00000384377 111 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC092423.1-201ENST00000430165 186 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC002429.1-201ENST00000437672 148 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC104332.1-201ENST00000440471 797 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 MTND3P10-201ENST00000450967 341 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AL049830.1-201ENST00000468034 425 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 RPL7P42-201ENST00000481005 679 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC011352.1-201ENST00000512300 793 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 RNU6-1096P-201ENST00000517089 102 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC005899.2-201ENST00000584353 90 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
TRIM40Q6P9F5 RNU4-40P-201ENST00000364351 143 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 RNU4-41P-201ENST00000364426 143 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 SNORA80D-201ENST00000384488 135 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 Z98949.2-201ENST00000440996 144 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 AC233266.1-201ENST00000454518 96 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 AC242852.1-201ENST00000612151 96 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 AC244015.1-201ENST00000622301 99 ntBASIC0.79□□□□□ -2.28
TRIM40Q6P9F5 Y_RNA.404-201ENST00000383978 102 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 MTND1P34-201ENST00000438556 671 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 LINC01399-202ENST00000458450 244 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 AC116353.2-201ENST00000505332 712 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 RNU6-307P-201ENST00000516743 106 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 AC136932.1-201ENST00000574771 208 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 AC004832.4-201ENST00000608952 331 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 AC007014.2-201ENST00000615581 479 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 PISRT1.1-201ENST00000616930 107 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 AC092794.2-201ENST00000620933 563 ntBASIC0.78□□□□□ -2.28
TRIM40Q6P9F5 RNU6-1301P-201ENST00000362724 104 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 Y_RNA.88-201ENST00000363029 99 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 RNU6-833P-201ENST00000363486 107 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 SNORD114-24-201ENST00000365029 72 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 RNU6-1310P-201ENST00000384153 107 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 MIR526A1-201ENST00000384897 85 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 MIR891A-201ENST00000401237 79 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 SNORD12B-201ENST00000410433 91 ntBASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.77□□□□□ -2.29
TRIM40Q6P9F5 RPL17P19-201ENST00000489069 552 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms