Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TTC39BQ5VTQ0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.66-201ENST00000362862 102 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 RNU1-96P-201ENST00000364163 162 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-461P-201ENST00000364195 107 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.617-201ENST00000410920 90 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 HMGN2P34-201ENST00000437647 269 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 CYP2C59P-201ENST00000457790 269 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 CKS1BP2-201ENST00000497342 240 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 SNORA18.4-201ENST00000516440 124 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 AC007751.1-201ENST00000529260 376 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 MIR5004-201ENST00000579078 107 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 AC073413.2-201ENST00000604332 360 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 JPX_2.1-201ENST00000614161 69 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
TTC39BQ5VTQ0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 MIR148B-201ENST00000362252 99 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-1298P-201ENST00000362456 101 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 Y_RNA.52-201ENST00000362760 96 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 SNORD58C-201ENST00000365223 64 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 MIR624-201ENST00000385217 97 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 AC115115.1-201ENST00000449927 248 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 RPS26P45-201ENST00000471748 340 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 RNU6-365P-201ENST00000517113 106 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 YPEL5P2-201ENST00000605553 359 ntBASIC3.34□□□□□ -1.87
TTC39BQ5VTQ0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-1164P-201ENST00000364428 107 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 MIR520G-201ENST00000385064 90 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 MIR891A-201ENST00000401237 79 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 RNA5SP127-201ENST00000411051 133 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 BX510359.1-201ENST00000456973 237 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 AC023141.11-201ENST00000508864 202 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-781P-201ENST00000516377 101 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-126P-201ENST00000516685 103 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 RPPH1-2P-201ENST00000516688 293 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 SNORA48.11-201ENST00000517015 89 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 AL365205.2-201ENST00000594586 68 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 AL670379.3-201ENST00000605040 251 ntBASIC3.33□□□□□ -1.88
TTC39BQ5VTQ0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 RNU6-647P-201ENST00000364243 107 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AC063976.4-201ENST00000421971 163 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AL445687.1-201ENST00000439946 251 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AC011406.1-201ENST00000512440 370 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 SNORA74D-201ENST00000516404 141 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 RNU7-128P-201ENST00000517247 62 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 RNU1-104P-201ENST00000517280 175 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 MIR3613-201ENST00000579844 87 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 AC091178.2-201ENST00000584401 117 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 MIR3651-201ENST00000630427 90 ntBASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TTC39BQ5VTQ0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 SNORA1-201ENST00000384107 130 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 SNORA9-201ENST00000384215 133 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AC233266.1-201ENST00000454518 96 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 MRPS17P9-201ENST00000511924 393 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 RNU7-99P-201ENST00000516271 62 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 MIR2682-201ENST00000580305 110 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AL022345.2-201ENST00000606307 135 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AC242852.1-201ENST00000612151 96 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AC244015.1-201ENST00000622301 99 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TTC39BQ5VTQ0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms