Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PRDX4P1-201ENST00000507189 574 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 MIR4504-201ENST00000577413 92 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC097460.3-201ENST00000623099 442 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-653P-201ENST00000363074 106 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 SNORD114-13-201ENST00000364377 74 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-400P-201ENST00000391173 106 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-390P-201ENST00000516259 103 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-455P-201ENST00000384681 107 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 RNU6-613P-201ENST00000410412 108 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC098592.1-201ENST00000419352 333 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AL157687.1-201ENST00000554853 619 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 MIR4742-201ENST00000581069 85 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 AC091965.4-201ENST00000607691 587 ntBASIC-0.62□□□□□ -2.51
UBR4Q5T4S7 SNORD75.2-201ENST00000408784 58 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AC111193.1-201ENST00000504097 155 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SNORA70.25-201ENST00000612741 95 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RNU6-841P-201ENST00000383872 107 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 MTCO2P33-201ENST00000402100 465 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RPL23AP75-201ENST00000491601 451 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SERF1AP1-201ENST00000514575 187 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RNU6-488P-201ENST00000515918 99 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AC121247.2-201ENST00000604776 136 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AL451064.1-201ENST00000607718 471 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AL159972.1-201ENST00000625150 448 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RNY3P4-201ENST00000384428 101 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SNORD41-201ENST00000386967 70 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SNORA81-201ENST00000408493 178 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 MED28P2-201ENST00000475771 317 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AC009646.1-201ENST00000510455 318 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SNRPGP1-201ENST00000553864 222 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RPL36P19-201ENST00000430744 301 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 MTATP6P26-201ENST00000445926 662 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SNORA31.14-201ENST00000516728 116 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 RNU1-29P-201ENST00000606574 126 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 AC104260.1-201ENST00000616660 539 ntBASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.63□□□□□ -2.51
UBR4Q5T4S7 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 RNU6-212P-201ENST00000362642 104 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MTND3P8-201ENST00000412909 339 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR4752-201ENST00000579672 72 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR8068-201ENST00000618032 68 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR8054-201ENST00000620877 86 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR6874-201ENST00000635894 71 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR891A-201ENST00000401237 79 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 VN1R83P-201ENST00000595685 445 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC022022.2-201ENST00000602989 360 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 RNU6-580P-201ENST00000365159 107 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MIR649-201ENST00000384843 97 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC074085.1-201ENST00000413598 418 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 MCFD2P1-201ENST00000417812 300 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC080013.3-201ENST00000606839 578 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC099654.8-201ENST00000637757 681 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC090616.4-201ENST00000448026 115 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 RNU6-63P-201ENST00000516690 95 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC087894.1-201ENST00000538359 518 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 AC021851.1-201ENST00000608537 1082 ntBASIC-0.64□□□□□ -2.51
UBR4Q5T4S7 RNU6-441P-201ENST00000384545 106 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 SUMO1P3-201ENST00000439961 304 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 RNU6-971P-201ENST00000516920 106 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AC023538.1-201ENST00000534576 736 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AL354692.1-201ENST00000423044 315 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 SNORA32.2-201ENST00000384049 122 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 RNU6-101P-201ENST00000410323 104 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 MTND3P17-201ENST00000416968 344 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AL353752.1-201ENST00000454946 260 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AC068587.4-201ENST00000533893 186 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 VN1R87P-201ENST00000596706 487 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 SGO1P1-201ENST00000603525 1447 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AC006927.4-201ENST00000639187 543 ntBASIC-0.65□□□□□ -2.51
UBR4Q5T4S7 AC015818.7-201ENST00000428754 109 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms