Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNFT1Q5M7Z0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RNFT1Q5M7Z0 ZNF962P-201ENST00000443465 3140 ntBASIC3.44□□□□□ -1.86
RNFT1Q5M7Z0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RNU4-16P-201ENST00000364737 141 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RNU6-438P-201ENST00000365561 103 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RNU6-616P-201ENST00000384353 107 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RPS15AP28-201ENST00000435088 386 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 AC087499.4-201ENST00000448505 178 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 AP001486.1-201ENST00000463339 476 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RAC1P2-201ENST00000511164 579 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 AP003484.1-201ENST00000530974 250 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 HSPE1P19-201ENST00000603327 295 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 AL513534.2-201ENST00000603836 250 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 SNORA62.6-201ENST00000606322 83 ntBASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
RNFT1Q5M7Z0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 MIR7-3-201ENST00000384898 110 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 AL627390.1-201ENST00000396055 340 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 MIR1253-201ENST00000408273 105 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 RN7SKP200-201ENST00000410564 320 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 AL512326.2-201ENST00000426359 151 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 RNU7-170P-201ENST00000459303 61 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 RNU7-99P-201ENST00000516271 62 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 RNU6-341P-201ENST00000516973 96 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 MIR3944-201ENST00000581277 108 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 U2.20-201ENST00000613956 192 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 MIR8058-201ENST00000615737 89 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 AC012314.7-201ENST00000619693 93 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNFT1Q5M7Z0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 AL159169.1-201ENST00000421119 127 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 AL035398.1-201ENST00000430869 322 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 SNRPGP14-201ENST00000435400 219 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 RPL32P34-201ENST00000486380 400 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 RNA5SP164-201ENST00000516533 110 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 AC019176.2-201ENST00000611579 315 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 MIR6076-201ENST00000617521 113 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNFT1Q5M7Z0 AL049781.1-201ENST00000623195 3585 ntBASIC3.4□□□□□ -1.86
RNFT1Q5M7Z0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
RNFT1Q5M7Z0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNFT1Q5M7Z0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 SNORD14E-201ENST00000364009 85 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-268P-201ENST00000364174 107 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-1274P-201ENST00000384557 107 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 RPS29P4-201ENST00000414733 161 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 U3.44-201ENST00000458938 192 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 AC026726.1-201ENST00000512859 601 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 AC002984.1-201ENST00000591692 448 ntBASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
RNFT1Q5M7Z0 MAPK10-373ENST00000641983 6772 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-1313P-201ENST00000362622 102 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 SNORA11.1-201ENST00000408133 129 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 ELOCP29-201ENST00000588193 334 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 U7.4-201ENST00000614961 63 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 MIR6079-201ENST00000635807 62 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 U6.105-201ENST00000637379 88 ntBASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNFT1Q5M7Z0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms