Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 Z98949.2-201ENST00000440996 144 ntBASIC2.65□□□□□ -1.99
FNDC3BQ53EP0 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
FNDC3BQ53EP0 AC024995.1-201ENST00000523014 93 ntBASIC2.65□□□□□ -1.99
FNDC3BQ53EP0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 RNU6-144P-201ENST00000383951 107 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 SNORA36B-201ENST00000410438 131 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AC099677.2-201ENST00000436385 175 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 RNY3P16-201ENST00000516338 101 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 RNA5SP282-201ENST00000516355 108 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.700-201ENST00000516806 100 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 Z83818.1-201ENST00000603584 150 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AP003357.1-201ENST00000604497 148 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AC011921.3-201ENST00000605540 361 ntBASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.64□□□□□ -1.99
FNDC3BQ53EP0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.29-201ENST00000362570 113 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 RNU6-923P-201ENST00000364753 107 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 SNORA8.3-201ENST00000384679 139 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 MIR520G-201ENST00000385064 90 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.621-201ENST00000411065 96 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AC233266.1-201ENST00000454518 96 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AL163195.1-201ENST00000496941 348 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 SNORA81.3-201ENST00000517283 198 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 MIR5094-201ENST00000578766 85 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AC069114.2-201ENST00000604699 304 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AC242852.1-201ENST00000612151 96 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 AC244015.1-201ENST00000622301 99 ntBASIC2.63□□□□□ -1.99
FNDC3BQ53EP0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 MIR181B1-201ENST00000385240 110 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RNU6-493P-201ENST00000391321 108 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 MIR1283-2-201ENST00000408621 87 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RPS4XP11-201ENST00000446897 772 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RNU7-94P-201ENST00000459576 63 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RNU6-182P-201ENST00000516970 105 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 RNU6-1096P-201ENST00000517089 102 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 AC127455.1-201ENST00000565496 145 ntBASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
FNDC3BQ53EP0 MIR367-201ENST00000362299 68 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 RNU6-1020P-201ENST00000363684 107 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 RNU4-10P-201ENST00000364383 140 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 SNORA72-201ENST00000384339 132 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 AC091021.1-201ENST00000468051 388 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 AC008413.1-201ENST00000511864 177 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 RNU7-193P-201ENST00000516723 65 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 RNU7-128P-201ENST00000517247 62 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 AC011604.1-201ENST00000545978 196 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 MIR4529-201ENST00000578110 78 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 MIR6715A-201ENST00000615929 79 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 MIR6079-201ENST00000635807 62 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 AC018630.2-201ENST00000534866 2403 ntBASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
FNDC3BQ53EP0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 TRBV12-1-201ENST00000479785 344 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 RNU1-104P-201ENST00000517280 175 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 MIR4724-201ENST00000579485 89 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 U6.108-201ENST00000637764 58 ntBASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FNDC3BQ53EP0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 RNU6-653P-201ENST00000363074 106 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 RNU4-17P-201ENST00000365598 141 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 Y_RNA.785-201ENST00000384290 109 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 MIR562-201ENST00000384894 95 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 RNU6-437P-201ENST00000459408 95 ntBASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
FNDC3BQ53EP0 SNORA31.25-201ENST00000517242 134 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms