Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC069294.1-201ENST00000608397 350 ntBASIC2.11□□□□□ -2.07
LTBQ06643 U6.106-201ENST00000636360 105 ntBASIC2.11□□□□□ -2.07
LTBQ06643 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
LTBQ06643 Y_RNA.124-201ENST00000363339 93 ntBASIC2.1□□□□□ -2.07
LTBQ06643 SNORD31B-201ENST00000364977 69 ntBASIC2.1□□□□□ -2.07
LTBQ06643 Y_RNA.310-201ENST00000365063 113 ntBASIC2.1□□□□□ -2.07
LTBQ06643 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
LTBQ06643 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
LTBQ06643 AL357139.1-201ENST00000407792 426 ntBASIC2.1□□□□□ -2.07
LTBQ06643 RNU6-855P-201ENST00000410395 104 ntBASIC2.1□□□□□ -2.07
LTBQ06643 RPS15AP28-201ENST00000435088 386 ntBASIC2.1□□□□□ -2.07
LTBQ06643 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
LTBQ06643 Y_RNA.662-201ENST00000516028 97 ntBASIC2.1□□□□□ -2.07
LTBQ06643 RNU6-1212P-201ENST00000517023 104 ntBASIC2.1□□□□□ -2.07
LTBQ06643 SUMO2P18-201ENST00000518873 252 ntBASIC2.1□□□□□ -2.07
LTBQ06643 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.1□□□□□ -2.07
LTBQ06643 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.1□□□□□ -2.07
LTBQ06643 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.1□□□□□ -2.07
LTBQ06643 MIR4498-201ENST00000577599 66 ntBASIC2.1□□□□□ -2.07
LTBQ06643 AL078604.3-201ENST00000615580 211 ntBASIC2.1□□□□□ -2.07
LTBQ06643 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.1□□□□□ -2.07
LTBQ06643 AC021753.1-201ENST00000635724 168 ntBASIC2.1□□□□□ -2.07
LTBQ06643 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.07
LTBQ06643 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
LTBQ06643 RNU1-23P-201ENST00000363361 144 ntBASIC2.09□□□□□ -2.07
LTBQ06643 RNA5SP393-201ENST00000363423 117 ntBASIC2.09□□□□□ -2.07
LTBQ06643 Y_RNA.240-201ENST00000364469 95 ntBASIC2.09□□□□□ -2.07
LTBQ06643 Y_RNA.368-201ENST00000365547 113 ntBASIC2.09□□□□□ -2.07
LTBQ06643 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
LTBQ06643 Y_RNA.435-201ENST00000384095 112 ntBASIC2.09□□□□□ -2.07
LTBQ06643 SNORA72.4-201ENST00000384174 132 ntBASIC2.09□□□□□ -2.07
LTBQ06643 MTCO2P33-201ENST00000402100 465 ntBASIC2.09□□□□□ -2.07
LTBQ06643 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
LTBQ06643 SNORD65B-201ENST00000459126 73 ntBASIC2.09□□□□□ -2.07
LTBQ06643 RNU1-104P-201ENST00000517280 175 ntBASIC2.09□□□□□ -2.07
LTBQ06643 MIR3133-201ENST00000583157 78 ntBASIC2.09□□□□□ -2.07
LTBQ06643 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
LTBQ06643 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
LTBQ06643 AC013791.1-201ENST00000616619 62 ntBASIC2.09□□□□□ -2.07
LTBQ06643 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.09□□□□□ -2.07
LTBQ06643 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LTBQ06643 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LTBQ06643 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.08□□□□□ -2.08
LTBQ06643 RNU4-10P-201ENST00000364383 140 ntBASIC2.08□□□□□ -2.08
LTBQ06643 Y_RNA.341-201ENST00000365341 102 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU1-138P-201ENST00000384093 164 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU6-746P-201ENST00000384112 109 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU6-187P-201ENST00000384139 106 ntBASIC2.08□□□□□ -2.08
LTBQ06643 SNORA20B-201ENST00000384220 132 ntBASIC2.08□□□□□ -2.08
LTBQ06643 Y_RNA.506-201ENST00000384494 102 ntBASIC2.08□□□□□ -2.08
LTBQ06643 Y_RNA.571-201ENST00000384753 98 ntBASIC2.08□□□□□ -2.08
LTBQ06643 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU6-710P-201ENST00000410424 105 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU2-32P-201ENST00000411193 191 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
LTBQ06643 SUMO1P4-201ENST00000429430 302 ntBASIC2.08□□□□□ -2.08
LTBQ06643 AL161788.1-201ENST00000441805 169 ntBASIC2.08□□□□□ -2.08
LTBQ06643 AC016925.1-201ENST00000458303 298 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RNU6-221P-201ENST00000459541 99 ntBASIC2.08□□□□□ -2.08
LTBQ06643 RPL36AP21-201ENST00000490372 323 ntBASIC2.08□□□□□ -2.08
LTBQ06643 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.08□□□□□ -2.08
LTBQ06643 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.08□□□□□ -2.08
LTBQ06643 AC027419.1-201ENST00000522976 328 ntBASIC2.08□□□□□ -2.08
LTBQ06643 AC100767.1-201ENST00000528178 123 ntBASIC2.08□□□□□ -2.08
LTBQ06643 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
LTBQ06643 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.08□□□□□ -2.08
LTBQ06643 AC104465.1-201ENST00000611365 139 ntBASIC2.08□□□□□ -2.08
LTBQ06643 MIR5739-201ENST00000619803 80 ntBASIC2.08□□□□□ -2.08
LTBQ06643 MIR6873-201ENST00000622788 63 ntBASIC2.08□□□□□ -2.08
LTBQ06643 snoZ196.1-201ENST00000625269 89 ntBASIC2.08□□□□□ -2.08
LTBQ06643 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.08□□□□□ -2.08
LTBQ06643 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LTBQ06643 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LTBQ06643 Y_RNA.170-201ENST00000363746 110 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-743P-201ENST00000364151 106 ntBASIC2.07□□□□□ -2.08
LTBQ06643 Y_RNA.287-201ENST00000364853 94 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-804P-201ENST00000384286 107 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-125P-201ENST00000384505 107 ntBASIC2.07□□□□□ -2.08
LTBQ06643 Y_RNA.572-201ENST00000384757 98 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU2-2P-201ENST00000410396 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU2-48P-201ENST00000410694 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-1135P-201ENST00000411083 103 ntBASIC2.07□□□□□ -2.08
LTBQ06643 AC016909.1-201ENST00000415916 166 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
LTBQ06643 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU6-1278P-201ENST00000516130 107 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNA5SP281-201ENST00000516504 135 ntBASIC2.07□□□□□ -2.08
LTBQ06643 AC022616.8-201ENST00000533569 253 ntBASIC2.07□□□□□ -2.08
LTBQ06643 MIR5194-201ENST00000582634 120 ntBASIC2.07□□□□□ -2.08
LTBQ06643 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
LTBQ06643 AL049779.4-201ENST00000604500 156 ntBASIC2.07□□□□□ -2.08
LTBQ06643 RNU2-4P-201ENST00000606190 192 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.15-201ENST00000611544 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.16-201ENST00000613119 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.12-201ENST00000613778 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.9-201ENST00000615427 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.11-201ENST00000616345 191 ntBASIC2.07□□□□□ -2.08
LTBQ06643 U2.2-201ENST00000616535 191 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 247.2 ms