Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORD115-47-201ENST00000391226 86 ntBASIC0.74□□□□□ -2.29
VSX2P58304 RNU5A-5P-201ENST00000411054 116 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC063976.4-201ENST00000421971 163 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC004941.2-201ENST00000427009 228 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AL137792.2-201ENST00000443484 235 ntBASIC0.74□□□□□ -2.29
VSX2P58304 UQCRBP2-201ENST00000447827 297 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC233266.1-201ENST00000454518 96 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC092989.1-201ENST00000481235 277 ntBASIC0.74□□□□□ -2.29
VSX2P58304 Y_RNA.670-201ENST00000516255 105 ntBASIC0.74□□□□□ -2.29
VSX2P58304 SCARNA16.2-201ENST00000516520 172 ntBASIC0.74□□□□□ -2.29
VSX2P58304 RNU2-56P-201ENST00000516826 190 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.74□□□□□ -2.29
VSX2P58304 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.74□□□□□ -2.29
VSX2P58304 AL121579.1-201ENST00000555129 305 ntBASIC0.74□□□□□ -2.29
VSX2P58304 RPL21P9-201ENST00000556149 474 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.74□□□□□ -2.29
VSX2P58304 MIR4661-201ENST00000582720 75 ntBASIC0.74□□□□□ -2.29
VSX2P58304 PRELID3BP2-201ENST00000605362 201 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC018462.2-201ENST00000605375 395 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AL096861.1-201ENST00000610899 123 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC242852.1-201ENST00000612151 96 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC244015.1-201ENST00000622301 99 ntBASIC0.74□□□□□ -2.29
VSX2P58304 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
VSX2P58304 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
VSX2P58304 RNU5F-3P-201ENST00000363767 117 ntBASIC0.73□□□□□ -2.29
VSX2P58304 RNU6-117P-201ENST00000365415 107 ntBASIC0.73□□□□□ -2.29
VSX2P58304 RNU6-1264P-201ENST00000383891 107 ntBASIC0.73□□□□□ -2.29
VSX2P58304 Y_RNA.466-201ENST00000384294 113 ntBASIC0.73□□□□□ -2.29
VSX2P58304 Y_RNA.498-201ENST00000384460 102 ntBASIC0.73□□□□□ -2.29
VSX2P58304 Y_RNA.540-201ENST00000384638 111 ntBASIC0.73□□□□□ -2.29
VSX2P58304 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
VSX2P58304 AL451046.2-201ENST00000403074 277 ntBASIC0.73□□□□□ -2.29
VSX2P58304 Y_RNA.594-201ENST00000410373 140 ntBASIC0.73□□□□□ -2.29
VSX2P58304 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.73□□□□□ -2.29
VSX2P58304 PCNPP5-201ENST00000452246 481 ntBASIC0.73□□□□□ -2.29
VSX2P58304 RNU6-329P-201ENST00000459618 107 ntBASIC0.73□□□□□ -2.29
VSX2P58304 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.73□□□□□ -2.29
VSX2P58304 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
VSX2P58304 AC018448.1-201ENST00000552843 316 ntBASIC0.73□□□□□ -2.29
VSX2P58304 MIR3192-201ENST00000584920 77 ntBASIC0.73□□□□□ -2.29
VSX2P58304 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
VSX2P58304 AC012557.2-201ENST00000605919 418 ntBASIC0.73□□□□□ -2.29
VSX2P58304 PVT1_3.1-201ENST00000620853 95 ntBASIC0.73□□□□□ -2.29
VSX2P58304 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VSX2P58304 Y_RNA.2-201ENST00000362330 96 ntBASIC0.72□□□□□ -2.29
VSX2P58304 RNU6-879P-201ENST00000364328 108 ntBASIC0.72□□□□□ -2.29
VSX2P58304 Y_RNA.318-201ENST00000365131 97 ntBASIC0.72□□□□□ -2.29
VSX2P58304 Y_RNA.358-201ENST00000365491 99 ntBASIC0.72□□□□□ -2.29
VSX2P58304 Y_RNA.364-201ENST00000365532 101 ntBASIC0.72□□□□□ -2.29
VSX2P58304 RNU6-1013P-201ENST00000384180 107 ntBASIC0.72□□□□□ -2.29
VSX2P58304 RNU6-376P-201ENST00000384731 106 ntBASIC0.72□□□□□ -2.29
VSX2P58304 MTCYBP4-201ENST00000401524 249 ntBASIC0.72□□□□□ -2.29
VSX2P58304 MIR548F1-201ENST00000408667 84 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AC006461.1-201ENST00000412637 326 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AL353997.1-201ENST00000432936 108 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AL049830.1-201ENST00000468034 425 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.72□□□□□ -2.29
VSX2P58304 RNU6-720P-201ENST00000516363 108 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AC105029.1-201ENST00000520250 669 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.72□□□□□ -2.29
VSX2P58304 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.72□□□□□ -2.29
VSX2P58304 EIF1P4-201ENST00000572664 335 ntBASIC0.72□□□□□ -2.29
VSX2P58304 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.72□□□□□ -2.29
VSX2P58304 AC127459.3-201ENST00000624328 466 ntBASIC0.72□□□□□ -2.29
VSX2P58304 MIR3688-2-201ENST00000636963 87 ntBASIC0.72□□□□□ -2.29
VSX2P58304 Y_RNA.404-201ENST00000383978 102 ntBASIC0.71□□□□□ -2.3
VSX2P58304 Y_RNA.453-201ENST00000384223 109 ntBASIC0.71□□□□□ -2.3
VSX2P58304 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
VSX2P58304 SNORA75.2-201ENST00000391138 150 ntBASIC0.71□□□□□ -2.3
VSX2P58304 SNORA75.3-201ENST00000391231 150 ntBASIC0.71□□□□□ -2.3
VSX2P58304 RNU6-1050P-201ENST00000410388 107 ntBASIC0.71□□□□□ -2.3
VSX2P58304 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.71□□□□□ -2.3
VSX2P58304 AC009161.1-201ENST00000417306 376 ntBASIC0.71□□□□□ -2.3
VSX2P58304 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.71□□□□□ -2.3
VSX2P58304 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.71□□□□□ -2.3
VSX2P58304 RPL7P42-201ENST00000481005 679 ntBASIC0.71□□□□□ -2.3
VSX2P58304 RNU7-28P-201ENST00000516759 62 ntBASIC0.71□□□□□ -2.3
VSX2P58304 AC022868.1-201ENST00000517767 391 ntBASIC0.71□□□□□ -2.3
VSX2P58304 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
VSX2P58304 AC104260.1-201ENST00000616660 539 ntBASIC0.71□□□□□ -2.3
VSX2P58304 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
VSX2P58304 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.7□□□□□ -2.3
VSX2P58304 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VSX2P58304 Y_RNA.157-201ENST00000363638 102 ntBASIC0.7□□□□□ -2.3
VSX2P58304 RNU1-133P-201ENST00000364867 167 ntBASIC0.7□□□□□ -2.3
VSX2P58304 SNORA80D-201ENST00000384488 135 ntBASIC0.7□□□□□ -2.3
VSX2P58304 RNU6-342P-201ENST00000384521 104 ntBASIC0.7□□□□□ -2.3
VSX2P58304 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
VSX2P58304 RNA5SP511-201ENST00000410487 115 ntBASIC0.7□□□□□ -2.3
VSX2P58304 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.7□□□□□ -2.3
VSX2P58304 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.7□□□□□ -2.3
VSX2P58304 RNU7-21P-201ENST00000459430 62 ntBASIC0.7□□□□□ -2.3
VSX2P58304 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
VSX2P58304 AC055872.1-201ENST00000570978 278 ntBASIC0.7□□□□□ -2.3
VSX2P58304 AC005828.6-201ENST00000606610 232 ntBASIC0.7□□□□□ -2.3
VSX2P58304 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
VSX2P58304 AL008636.1-201ENST00000625038 1018 ntBASIC0.7□□□□□ -2.3
VSX2P58304 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.7□□□□□ -2.3
VSX2P58304 AC023934.1-201ENST00000574529 2389 ntBASIC0.69□□□□□ -2.3
VSX2P58304 SNORD114-24-201ENST00000365029 72 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms