Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HSPE1P25-201ENST00000455484 251 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 RNA5SP182-201ENST00000516064 82 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 RNU6-1278P-201ENST00000516130 107 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 RNU7-172P-201ENST00000517125 64 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 IGLV3-17-201ENST00000519099 244 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN2P57739 AC084364.2-201ENST00000546924 395 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 AC008269.2-201ENST00000561915 1105 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CLDN2P57739 AC131280.1-202ENST00000624067 4211 ntBASIC1.89□□□□□ -2.11
CLDN2P57739 RNA5SP276-201ENST00000362580 94 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU1-17P-201ENST00000363022 152 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 Y_RNA.124-201ENST00000363339 93 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 Y_RNA.286-201ENST00000364813 102 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU6-806P-201ENST00000365147 105 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU6-1105P-201ENST00000384774 107 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU6-1248P-201ENST00000391096 64 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN2P57739 RPL21P38-201ENST00000418090 167 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 AC245047.4-201ENST00000433189 144 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU7-94P-201ENST00000459576 63 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 AC025033.1-201ENST00000463883 194 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RNU7-128P-201ENST00000517247 62 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 AC121758.2-201ENST00000553271 193 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 RPL21P9-201ENST00000556149 474 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 MIR5694-201ENST00000581190 76 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
CLDN2P57739 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CLDN2P57739 U6.108-201ENST00000637764 58 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 U6.104-201ENST00000637979 90 ntBASIC1.88□□□□□ -2.11
CLDN2P57739 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLDN2P57739 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CLDN2P57739 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CLDN2P57739 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CLDN2P57739 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
CLDN2P57739 Y_RNA.26-201ENST00000362539 101 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 snoU2_19.2-201ENST00000363024 80 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 Y_RNA.136-201ENST00000363444 102 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 RNU6-290P-201ENST00000365212 101 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 RNU6-102P-201ENST00000384485 104 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 AC009310.1-201ENST00000414414 451 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.87□□□□□ -2.11
CLDN2P57739 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.87□□□□□ -2.11
CLDN2P57739 RNU6-1309P-201ENST00000363305 108 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 Y_RNA.133-201ENST00000363428 110 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 RNU6-112P-201ENST00000363599 104 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 RNU6-117P-201ENST00000365415 107 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 SNORA53-201ENST00000391141 249 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
CLDN2P57739 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 AL603825.1-201ENST00000438481 80 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN2P57739 AC098869.1-201ENST00000481627 292 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 AC010409.1-201ENST00000487382 476 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 AC090255.1-201ENST00000495779 349 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 MTCO2P24-201ENST00000515611 426 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN2P57739 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLDN2P57739 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.86□□□□□ -2.11
CLDN2P57739 AC037487.3-201ENST00000606668 112 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 MIR8062-201ENST00000621515 85 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CLDN2P57739 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLDN2P57739 Y_RNA.47-201ENST00000362697 108 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 Y_RNA.84-201ENST00000363011 104 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 RNU6-238P-201ENST00000363313 106 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 SNORA63D-201ENST00000364359 132 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.85□□□□□ -2.11
CLDN2P57739 RNU6-376P-201ENST00000384731 106 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 Y_RNA.569-201ENST00000384749 103 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 MIR562-201ENST00000384894 95 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CLDN2P57739 HMGN1P10-201ENST00000474557 553 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.85□□□□□ -2.11
CLDN2P57739 RNU6-1337P-201ENST00000516525 95 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 RNA5SP481-201ENST00000516814 122 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 DEFB117-201ENST00000602356 141 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 AC010900.2-201ENST00000604508 210 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 AC018630.2-201ENST00000534866 2403 ntBASIC1.85□□□□□ -2.11
CLDN2P57739 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLDN2P57739 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms