Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.383-201ENST00000383855 97 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 RNU6-505P-201ENST00000384427 107 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 SNORA8-201ENST00000384574 139 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 RNU11-5P-201ENST00000391216 129 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 AC245047.4-201ENST00000433189 144 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 RPS26P45-201ENST00000471748 340 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 AC010409.1-201ENST00000487382 476 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.77□□□□□ -2.13
CLDN20P56880 RNU7-172P-201ENST00000517125 64 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.77□□□□□ -2.13
CLDN20P56880 AC084364.2-201ENST00000546924 395 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
CLDN20P56880 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
CLDN20P56880 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLDN20P56880 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CLDN20P56880 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLDN20P56880 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CLDN20P56880 RNU6-1309P-201ENST00000363305 108 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 RNU6-238P-201ENST00000363313 106 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 Y_RNA.149-201ENST00000363558 117 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 RNU6-112P-201ENST00000363599 104 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 RNU6-290P-201ENST00000365212 101 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 RNA5SP100-201ENST00000410903 110 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 RNA5SP59-201ENST00000410922 110 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN20P56880 AC024067.1-201ENST00000426199 223 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN20P56880 RNU6-1278P-201ENST00000516130 107 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.76□□□□□ -2.13
CLDN20P56880 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.76□□□□□ -2.13
CLDN20P56880 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.76□□□□□ -2.13
CLDN20P56880 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLDN20P56880 AC092881.1-201ENST00000638218 2733 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 Y_RNA.133-201ENST00000363428 110 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 RNU6-117P-201ENST00000365415 107 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 Y_RNA.512-201ENST00000384518 102 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 Y_RNA.569-201ENST00000384749 103 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 MIR215-201ENST00000384858 110 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
CLDN20P56880 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.75□□□□□ -2.13
CLDN20P56880 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 AL163195.1-201ENST00000496941 348 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 MTCO2P24-201ENST00000515611 426 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 DEFB117-201ENST00000602356 141 ntBASIC1.75□□□□□ -2.13
CLDN20P56880 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.75□□□□□ -2.13
CLDN20P56880 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLDN20P56880 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN20P56880 Y_RNA.47-201ENST00000362697 108 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 Y_RNA.84-201ENST00000363011 104 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 Y_RNA.136-201ENST00000363444 102 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 SNORA63D-201ENST00000364359 132 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 Y_RNA.541-201ENST00000384640 113 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 MIR520A-201ENST00000384862 85 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CLDN20P56880 AC009310.1-201ENST00000414414 451 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 MTCYBP9-201ENST00000431021 303 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 MTND4LP30-201ENST00000454092 297 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 RNA5SP57-201ENST00000459463 123 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 HMGN1P10-201ENST00000474557 553 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 RNU6-1337P-201ENST00000516525 95 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN20P56880 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
CLDN20P56880 RPL21P9-201ENST00000556149 474 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AC073413.2-201ENST00000604332 360 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AC010900.2-201ENST00000604508 210 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 AL773524.1-201ENST00000614065 229 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 MIR8062-201ENST00000621515 85 ntBASIC1.74□□□□□ -2.13
CLDN20P56880 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN20P56880 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN20P56880 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 RNU6-326P-201ENST00000365480 107 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 RNU6-296P-201ENST00000384608 107 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 RNU6-376P-201ENST00000384731 106 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 RNU6-1248P-201ENST00000391096 64 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 SNORA53-201ENST00000391141 249 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 AC019129.1-201ENST00000403786 261 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN20P56880 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN20P56880 RNU7-94P-201ENST00000459576 63 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 MIR3145-201ENST00000580727 82 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 AC037487.3-201ENST00000606668 112 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 U6.104-201ENST00000637979 90 ntBASIC1.73□□□□□ -2.13
CLDN20P56880 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLDN20P56880 Y_RNA.376-201ENST00000365638 108 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.72□□□□□ -2.13
CLDN20P56880 Y_RNA.418-201ENST00000384029 102 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 RNU6-855P-201ENST00000410395 104 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 RNU6-1203P-201ENST00000410703 110 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.72□□□□□ -2.13
CLDN20P56880 AL445685.2-201ENST00000422551 342 ntBASIC1.72□□□□□ -2.13
CLDN20P56880 MTND3P2-201ENST00000438452 342 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms