Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
COPB1P53618 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
COPB1P53618 SNORA27.1-201ENST00000362604 124 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNA5SP138-201ENST00000365098 114 ntBASIC2.3□□□□□ -2.04
COPB1P53618 Y_RNA.368-201ENST00000365547 113 ntBASIC2.3□□□□□ -2.04
COPB1P53618 MIR873-201ENST00000401120 77 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.3□□□□□ -2.04
COPB1P53618 SRIP3-201ENST00000413200 219 ntBASIC2.3□□□□□ -2.04
COPB1P53618 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.3□□□□□ -2.04
COPB1P53618 AC024067.1-201ENST00000426199 223 ntBASIC2.3□□□□□ -2.04
COPB1P53618 AC009238.1-201ENST00000442165 424 ntBASIC2.3□□□□□ -2.04
COPB1P53618 AC009237.6-201ENST00000446969 424 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
COPB1P53618 Y_RNA.638-201ENST00000459374 113 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNU1-40P-201ENST00000516816 164 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNU1-97P-201ENST00000516872 164 ntBASIC2.3□□□□□ -2.04
COPB1P53618 RNU6-856P-201ENST00000516959 98 ntBASIC2.3□□□□□ -2.04
COPB1P53618 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.3□□□□□ -2.04
COPB1P53618 AC009127.3-201ENST00000570531 403 ntBASIC2.3□□□□□ -2.04
COPB1P53618 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
COPB1P53618 AL008718.3-201ENST00000610217 321 ntBASIC2.3□□□□□ -2.04
COPB1P53618 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.3□□□□□ -2.04
COPB1P53618 Y_RNA.310-201ENST00000365063 113 ntBASIC2.29□□□□□ -2.04
COPB1P53618 RNU6-211P-201ENST00000384047 107 ntBASIC2.29□□□□□ -2.04
COPB1P53618 MIR1262-201ENST00000408276 93 ntBASIC2.29□□□□□ -2.04
COPB1P53618 RNU6-710P-201ENST00000410424 105 ntBASIC2.29□□□□□ -2.04
COPB1P53618 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
COPB1P53618 Y_RNA.626-201ENST00000411288 95 ntBASIC2.29□□□□□ -2.04
COPB1P53618 SNORA70.12-201ENST00000516084 153 ntBASIC2.29□□□□□ -2.04
COPB1P53618 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
COPB1P53618 AL078604.3-201ENST00000615580 211 ntBASIC2.29□□□□□ -2.04
COPB1P53618 AC073349.3-201ENST00000617616 186 ntBASIC2.29□□□□□ -2.04
COPB1P53618 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
COPB1P53618 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
COPB1P53618 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COPB1P53618 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
COPB1P53618 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COPB1P53618 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
COPB1P53618 Y_RNA.83-201ENST00000363005 113 ntBASIC2.28□□□□□ -2.04
COPB1P53618 Y_RNA.172-201ENST00000363765 102 ntBASIC2.28□□□□□ -2.04
COPB1P53618 Y_RNA.199-201ENST00000364014 102 ntBASIC2.28□□□□□ -2.04
COPB1P53618 Y_RNA.297-201ENST00000364950 91 ntBASIC2.28□□□□□ -2.04
COPB1P53618 RNU6-1240P-201ENST00000365155 104 ntBASIC2.28□□□□□ -2.04
COPB1P53618 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
COPB1P53618 RNU6-763P-201ENST00000390865 106 ntBASIC2.28□□□□□ -2.04
COPB1P53618 SNORA26.5-201ENST00000391215 123 ntBASIC2.28□□□□□ -2.04
COPB1P53618 AC008134.1-201ENST00000420943 193 ntBASIC2.28□□□□□ -2.04
COPB1P53618 Y_RNA.679-201ENST00000516416 91 ntBASIC2.28□□□□□ -2.04
COPB1P53618 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.28□□□□□ -2.04
COPB1P53618 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.28□□□□□ -2.04
COPB1P53618 AC002984.1-201ENST00000591692 448 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.15-201ENST00000611544 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.16-201ENST00000613119 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.12-201ENST00000613778 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.20-201ENST00000613956 192 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.9-201ENST00000615427 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.11-201ENST00000616345 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.2-201ENST00000616535 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.3-201ENST00000617785 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.19-201ENST00000618602 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 RNU2-1-201ENST00000618664 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.6-201ENST00000619225 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.5-201ENST00000619465 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 U2.10-201ENST00000620268 191 ntBASIC2.28□□□□□ -2.04
COPB1P53618 AC006435.5-201ENST00000624486 112 ntBASIC2.28□□□□□ -2.04
COPB1P53618 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.28□□□□□ -2.04
COPB1P53618 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.28□□□□□ -2.05
COPB1P53618 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
COPB1P53618 Y_RNA.456-201ENST00000384232 111 ntBASIC2.27□□□□□ -2.05
COPB1P53618 AC060773.1-201ENST00000421698 310 ntBASIC2.27□□□□□ -2.05
COPB1P53618 HSPE1P13-201ENST00000451143 297 ntBASIC2.27□□□□□ -2.05
COPB1P53618 snoU13.23-201ENST00000458863 104 ntBASIC2.27□□□□□ -2.05
COPB1P53618 U8.19-201ENST00000459095 133 ntBASIC2.27□□□□□ -2.05
COPB1P53618 RPS26P55-201ENST00000471178 356 ntBASIC2.27□□□□□ -2.05
COPB1P53618 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.27□□□□□ -2.05
COPB1P53618 AC108210.2-201ENST00000503681 201 ntBASIC2.27□□□□□ -2.05
COPB1P53618 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.27□□□□□ -2.05
COPB1P53618 CYCSP26-201ENST00000534107 320 ntBASIC2.27□□□□□ -2.05
COPB1P53618 CBX3P4-201ENST00000538909 354 ntBASIC2.27□□□□□ -2.05
COPB1P53618 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
COPB1P53618 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.27□□□□□ -2.05
COPB1P53618 AC068700.1-201ENST00000565862 3754 ntBASIC2.27□□□□□ -2.05
COPB1P53618 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COPB1P53618 MIR411-201ENST00000362239 96 ntBASIC2.26□□□□□ -2.05
COPB1P53618 Y_RNA.99-201ENST00000363138 105 ntBASIC2.26□□□□□ -2.05
COPB1P53618 Y_RNA.304-201ENST00000365011 112 ntBASIC2.26□□□□□ -2.05
COPB1P53618 SNORA72.4-201ENST00000384174 132 ntBASIC2.26□□□□□ -2.05
COPB1P53618 RNU6-855P-201ENST00000410395 104 ntBASIC2.26□□□□□ -2.05
COPB1P53618 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.26□□□□□ -2.05
COPB1P53618 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
COPB1P53618 SNORA81.3-201ENST00000517283 198 ntBASIC2.26□□□□□ -2.05
COPB1P53618 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
COPB1P53618 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
COPB1P53618 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COPB1P53618 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COPB1P53618 Y_RNA.29-201ENST00000362570 113 ntBASIC2.25□□□□□ -2.05
COPB1P53618 RNU6-271P-201ENST00000363858 105 ntBASIC2.25□□□□□ -2.05
COPB1P53618 RNU6-1048P-201ENST00000364054 107 ntBASIC2.25□□□□□ -2.05
COPB1P53618 Y_RNA.341-201ENST00000365341 102 ntBASIC2.25□□□□□ -2.05
COPB1P53618 MIR548I3-201ENST00000408378 149 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms