Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 MIR548A2-201ENST00000384956 97 ntBASIC4.41□□□□□ -1.7
HDGFP51858 SNORA48.8-201ENST00000391324 134 ntBASIC4.41□□□□□ -1.7
HDGFP51858 AL135938.1-201ENST00000443141 297 ntBASIC4.41□□□□□ -1.7
HDGFP51858 RNU6-893P-201ENST00000458841 100 ntBASIC4.41□□□□□ -1.7
HDGFP51858 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.41□□□□□ -1.7
HDGFP51858 AC107016.2-201ENST00000547968 190 ntBASIC4.41□□□□□ -1.7
HDGFP51858 AL360157.1-201ENST00000565962 87 ntBASIC4.41□□□□□ -1.7
HDGFP51858 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HDGFP51858 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HDGFP51858 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.4□□□□□ -1.7
HDGFP51858 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HDGFP51858 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDGFP51858 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDGFP51858 Y_RNA.265-201ENST00000364677 108 ntBASIC4.4□□□□□ -1.71
HDGFP51858 RNU6-750P-201ENST00000390946 107 ntBASIC4.4□□□□□ -1.71
HDGFP51858 EIF4EP4-201ENST00000424916 578 ntBASIC4.4□□□□□ -1.71
HDGFP51858 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.4□□□□□ -1.71
HDGFP51858 RNU6-693P-201ENST00000516134 107 ntBASIC4.4□□□□□ -1.71
HDGFP51858 AC104984.5-201ENST00000586878 94 ntBASIC4.4□□□□□ -1.71
HDGFP51858 FAM71BP1-201ENST00000604431 523 ntBASIC4.4□□□□□ -1.71
HDGFP51858 AC006435.5-201ENST00000624486 112 ntBASIC4.4□□□□□ -1.71
HDGFP51858 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HDGFP51858 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HDGFP51858 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDGFP51858 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDGFP51858 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDGFP51858 RNU6-888P-201ENST00000363010 101 ntBASIC4.39□□□□□ -1.71
HDGFP51858 SNORA63D-201ENST00000364359 132 ntBASIC4.39□□□□□ -1.71
HDGFP51858 RNA5SP189-201ENST00000364920 115 ntBASIC4.39□□□□□ -1.71
HDGFP51858 RNU1-89P-201ENST00000384592 164 ntBASIC4.39□□□□□ -1.71
HDGFP51858 RPL23AP48-201ENST00000406913 488 ntBASIC4.39□□□□□ -1.71
HDGFP51858 AC105272.1-201ENST00000438604 198 ntBASIC4.39□□□□□ -1.71
HDGFP51858 AC010099.1-201ENST00000455434 375 ntBASIC4.39□□□□□ -1.71
HDGFP51858 RNU7-172P-201ENST00000517125 64 ntBASIC4.39□□□□□ -1.71
HDGFP51858 AC109329.2-201ENST00000519658 482 ntBASIC4.39□□□□□ -1.71
HDGFP51858 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HDGFP51858 AC080128.1-201ENST00000474389 1917 ntBASIC4.38□□□□□ -1.71
HDGFP51858 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.38□□□□□ -1.71
HDGFP51858 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HDGFP51858 Y_RNA.93-201ENST00000363066 109 ntBASIC4.38□□□□□ -1.71
HDGFP51858 Y_RNA.221-201ENST00000364248 96 ntBASIC4.38□□□□□ -1.71
HDGFP51858 RNU6-1240P-201ENST00000365155 104 ntBASIC4.38□□□□□ -1.71
HDGFP51858 RNU6-1104P-201ENST00000384723 104 ntBASIC4.38□□□□□ -1.71
HDGFP51858 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.38□□□□□ -1.71
HDGFP51858 RNA5SP57-201ENST00000459463 123 ntBASIC4.38□□□□□ -1.71
HDGFP51858 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.38□□□□□ -1.71
HDGFP51858 RPS26P48-201ENST00000491713 339 ntBASIC4.38□□□□□ -1.71
HDGFP51858 AC097462.1-201ENST00000514125 324 ntBASIC4.38□□□□□ -1.71
HDGFP51858 RNU6-948P-201ENST00000516374 107 ntBASIC4.38□□□□□ -1.71
HDGFP51858 AC008739.2-201ENST00000597006 317 ntBASIC4.38□□□□□ -1.71
HDGFP51858 AC090517.3-201ENST00000625170 141 ntBASIC4.38□□□□□ -1.71
HDGFP51858 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HDGFP51858 SNORA31-201ENST00000362607 130 ntBASIC4.37□□□□□ -1.71
HDGFP51858 Y_RNA.213-201ENST00000364178 111 ntBASIC4.37□□□□□ -1.71
HDGFP51858 MIR2114-201ENST00000516645 80 ntBASIC4.37□□□□□ -1.71
HDGFP51858 MIR4438-201ENST00000585271 93 ntBASIC4.37□□□□□ -1.71
HDGFP51858 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.37□□□□□ -1.71
HDGFP51858 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.37□□□□□ -1.71
HDGFP51858 RNA5SP322-201ENST00000363617 119 ntBASIC4.36□□□□□ -1.71
HDGFP51858 RNU6-944P-201ENST00000364023 107 ntBASIC4.36□□□□□ -1.71
HDGFP51858 RNU6-234P-201ENST00000365229 104 ntBASIC4.36□□□□□ -1.71
HDGFP51858 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.36□□□□□ -1.71
HDGFP51858 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.36□□□□□ -1.71
HDGFP51858 SCGB1D5P-201ENST00000515134 247 ntBASIC4.36□□□□□ -1.71
HDGFP51858 MIR4319-201ENST00000577285 85 ntBASIC4.36□□□□□ -1.71
HDGFP51858 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.36□□□□□ -1.71
HDGFP51858 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDGFP51858 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HDGFP51858 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDGFP51858 AC096644.4-201ENST00000563417 2912 ntBASIC4.35□□□□□ -1.71
HDGFP51858 RNU6-198P-201ENST00000384258 104 ntBASIC4.35□□□□□ -1.71
HDGFP51858 SNORD67-201ENST00000390833 111 ntBASIC4.35□□□□□ -1.71
HDGFP51858 MIR1294-201ENST00000408503 142 ntBASIC4.35□□□□□ -1.71
HDGFP51858 Z98742.2-201ENST00000431564 187 ntBASIC4.35□□□□□ -1.71
HDGFP51858 AC022137.1-201ENST00000483735 151 ntBASIC4.35□□□□□ -1.71
HDGFP51858 SUMO2P16-201ENST00000519475 264 ntBASIC4.35□□□□□ -1.71
HDGFP51858 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.35□□□□□ -1.71
HDGFP51858 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.35□□□□□ -1.71
HDGFP51858 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HDGFP51858 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.35□□□□□ -1.71
HDGFP51858 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.35□□□□□ -1.71
HDGFP51858 ZNF720P1-201ENST00000562403 1939 ntBASIC4.34□□□□□ -1.71
HDGFP51858 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDGFP51858 Y_RNA.244-201ENST00000364484 109 ntBASIC4.34□□□□□ -1.71
HDGFP51858 SNORD31B-201ENST00000364977 69 ntBASIC4.34□□□□□ -1.71
HDGFP51858 SNORD24-201ENST00000383884 75 ntBASIC4.34□□□□□ -1.71
HDGFP51858 Y_RNA.621-201ENST00000411065 96 ntBASIC4.34□□□□□ -1.71
HDGFP51858 RN7SKP132-201ENST00000516001 208 ntBASIC4.34□□□□□ -1.71
HDGFP51858 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.34□□□□□ -1.71
HDGFP51858 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.34□□□□□ -1.72
HDGFP51858 AC062016.1-201ENST00000355719 319 ntBASIC4.33□□□□□ -1.72
HDGFP51858 Y_RNA.290-201ENST00000364879 114 ntBASIC4.33□□□□□ -1.72
HDGFP51858 AC097463.2-201ENST00000421074 142 ntBASIC4.33□□□□□ -1.72
HDGFP51858 AL353689.1-201ENST00000438895 199 ntBASIC4.33□□□□□ -1.72
HDGFP51858 RPL39P39-201ENST00000455840 151 ntBASIC4.33□□□□□ -1.72
HDGFP51858 RNU7-23P-201ENST00000459465 62 ntBASIC4.33□□□□□ -1.72
HDGFP51858 RNU6-521P-201ENST00000516663 105 ntBASIC4.33□□□□□ -1.72
HDGFP51858 RNU6-1096P-201ENST00000517089 102 ntBASIC4.33□□□□□ -1.72
HDGFP51858 AC068657.1-201ENST00000520807 306 ntBASIC4.33□□□□□ -1.72
HDGFP51858 AP000867.2-201ENST00000532468 320 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms