Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC010469.2-201ENST00000496412 480 ntBASIC1.22□□□□□ -2.21
GPC3P51654 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.22□□□□□ -2.21
GPC3P51654 SNORA40.9-201ENST00000515895 93 ntBASIC1.22□□□□□ -2.21
GPC3P51654 SUMO2P16-201ENST00000519475 264 ntBASIC1.22□□□□□ -2.21
GPC3P51654 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.22□□□□□ -2.21
GPC3P51654 FRG2DP-202ENST00000566967 323 ntBASIC1.22□□□□□ -2.21
GPC3P51654 SNORA28-201ENST00000606769 126 ntBASIC1.22□□□□□ -2.21
GPC3P51654 AC021506.2-201ENST00000612354 169 ntBASIC1.22□□□□□ -2.21
GPC3P51654 U6.108-201ENST00000637764 58 ntBASIC1.22□□□□□ -2.21
GPC3P51654 RNA5SP361-201ENST00000362686 118 ntBASIC1.21□□□□□ -2.22
GPC3P51654 Y_RNA.224-201ENST00000364308 111 ntBASIC1.21□□□□□ -2.22
GPC3P51654 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
GPC3P51654 RNU6-1080P-201ENST00000383982 107 ntBASIC1.21□□□□□ -2.22
GPC3P51654 RNU6-890P-201ENST00000384121 107 ntBASIC1.21□□□□□ -2.22
GPC3P51654 RNU6-1009P-201ENST00000390996 107 ntBASIC1.21□□□□□ -2.22
GPC3P51654 AL034345.1-201ENST00000407768 123 ntBASIC1.21□□□□□ -2.22
GPC3P51654 Y_RNA.592-201ENST00000410274 109 ntBASIC1.21□□□□□ -2.22
GPC3P51654 SNORD12B-201ENST00000410433 91 ntBASIC1.21□□□□□ -2.22
GPC3P51654 AC245047.3-201ENST00000429428 127 ntBASIC1.21□□□□□ -2.22
GPC3P51654 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
GPC3P51654 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
GPC3P51654 FGF7P4-201ENST00000509595 295 ntBASIC1.21□□□□□ -2.22
GPC3P51654 RNU6-1213P-201ENST00000517075 94 ntBASIC1.21□□□□□ -2.22
GPC3P51654 MIR4452-201ENST00000583004 71 ntBASIC1.21□□□□□ -2.22
GPC3P51654 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
GPC3P51654 AC018630.2-201ENST00000534866 2403 ntBASIC1.21□□□□□ -2.22
GPC3P51654 Y_RNA.390-201ENST00000383932 102 ntBASIC1.2□□□□□ -2.22
GPC3P51654 SNORA20B-201ENST00000384220 132 ntBASIC1.2□□□□□ -2.22
GPC3P51654 RNU6-318P-201ENST00000384283 103 ntBASIC1.2□□□□□ -2.22
GPC3P51654 Y_RNA.605-201ENST00000410577 105 ntBASIC1.2□□□□□ -2.22
GPC3P51654 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.2□□□□□ -2.22
GPC3P51654 RAB28P5-201ENST00000427490 651 ntBASIC1.2□□□□□ -2.22
GPC3P51654 AC236972.2-201ENST00000434979 310 ntBASIC1.2□□□□□ -2.22
GPC3P51654 FCF1P4-201ENST00000448326 183 ntBASIC1.2□□□□□ -2.22
GPC3P51654 HSPE1P13-201ENST00000451143 297 ntBASIC1.2□□□□□ -2.22
GPC3P51654 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
GPC3P51654 AC097462.1-201ENST00000514125 324 ntBASIC1.2□□□□□ -2.22
GPC3P51654 RNU6-1278P-201ENST00000516130 107 ntBASIC1.2□□□□□ -2.22
GPC3P51654 RNU7-172P-201ENST00000517125 64 ntBASIC1.2□□□□□ -2.22
GPC3P51654 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.2□□□□□ -2.22
GPC3P51654 MIR8054-201ENST00000620877 86 ntBASIC1.2□□□□□ -2.22
GPC3P51654 MIR1302-1-201ENST00000637932 143 ntBASIC1.2□□□□□ -2.22
GPC3P51654 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
GPC3P51654 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
GPC3P51654 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
GPC3P51654 SNORA27.1-201ENST00000362604 124 ntBASIC1.19□□□□□ -2.22
GPC3P51654 RNY3P4-201ENST00000384428 101 ntBASIC1.19□□□□□ -2.22
GPC3P51654 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
GPC3P51654 MIR628-201ENST00000385229 95 ntBASIC1.19□□□□□ -2.22
GPC3P51654 MIR873-201ENST00000401120 77 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.19□□□□□ -2.22
GPC3P51654 MTND5P20-201ENST00000448677 143 ntBASIC1.19□□□□□ -2.22
GPC3P51654 RPS27P1-201ENST00000450552 247 ntBASIC1.19□□□□□ -2.22
GPC3P51654 U8.22-201ENST00000459141 133 ntBASIC1.19□□□□□ -2.22
GPC3P51654 SNORA70.12-201ENST00000516084 153 ntBASIC1.19□□□□□ -2.22
GPC3P51654 RNU7-28P-201ENST00000516759 62 ntBASIC1.19□□□□□ -2.22
GPC3P51654 RNU7-128P-201ENST00000517247 62 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AC022217.4-201ENST00000604389 163 ntBASIC1.19□□□□□ -2.22
GPC3P51654 BX284668.6-201ENST00000606899 438 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AL132765.2-201ENST00000610812 351 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AL357075.2-201ENST00000614906 189 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AC087588.2-201ENST00000617667 426 ntBASIC1.19□□□□□ -2.22
GPC3P51654 AL138825.1-201ENST00000618587 192 ntBASIC1.19□□□□□ -2.22
GPC3P51654 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
GPC3P51654 Y_RNA.116-201ENST00000363292 103 ntBASIC1.18□□□□□ -2.22
GPC3P51654 Y_RNA.263-201ENST00000364659 114 ntBASIC1.18□□□□□ -2.22
GPC3P51654 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
GPC3P51654 RNU6-440P-201ENST00000390882 105 ntBASIC1.18□□□□□ -2.22
GPC3P51654 SNORD78.2-201ENST00000391076 69 ntBASIC1.18□□□□□ -2.22
GPC3P51654 RNY4P36-201ENST00000391116 96 ntBASIC1.18□□□□□ -2.22
GPC3P51654 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
GPC3P51654 RNA5SP20-201ENST00000515976 84 ntBASIC1.18□□□□□ -2.22
GPC3P51654 RNU6-277P-201ENST00000516272 106 ntBASIC1.18□□□□□ -2.22
GPC3P51654 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
GPC3P51654 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.18□□□□□ -2.22
GPC3P51654 AC023157.2-201ENST00000540596 141 ntBASIC1.18□□□□□ -2.22
GPC3P51654 MIR548S-201ENST00000581352 82 ntBASIC1.18□□□□□ -2.22
GPC3P51654 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
GPC3P51654 AC006380.1-201ENST00000603598 186 ntBASIC1.18□□□□□ -2.22
GPC3P51654 U6.115-201ENST00000636045 103 ntBASIC1.18□□□□□ -2.22
GPC3P51654 AC068647.2-201ENST00000637380 353 ntBASIC1.18□□□□□ -2.22
GPC3P51654 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
GPC3P51654 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
GPC3P51654 Y_RNA.187-201ENST00000363918 113 ntBASIC1.17□□□□□ -2.22
GPC3P51654 Y_RNA.314-201ENST00000365114 102 ntBASIC1.17□□□□□ -2.22
GPC3P51654 RNU6-407P-201ENST00000365280 104 ntBASIC1.17□□□□□ -2.22
GPC3P51654 RNU6-1040P-201ENST00000383974 107 ntBASIC1.17□□□□□ -2.22
GPC3P51654 Y_RNA.428-201ENST00000384078 102 ntBASIC1.17□□□□□ -2.22
GPC3P51654 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
GPC3P51654 AL355796.1-201ENST00000406706 323 ntBASIC1.17□□□□□ -2.22
GPC3P51654 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.17□□□□□ -2.22
GPC3P51654 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
GPC3P51654 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.17□□□□□ -2.22
GPC3P51654 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.17□□□□□ -2.22
GPC3P51654 MTCO3P10-201ENST00000455912 772 ntBASIC1.17□□□□□ -2.22
GPC3P51654 Y_RNA.718-201ENST00000517110 102 ntBASIC1.17□□□□□ -2.22
GPC3P51654 AC027419.1-201ENST00000522976 328 ntBASIC1.17□□□□□ -2.22
GPC3P51654 AC005828.6-201ENST00000606610 232 ntBASIC1.17□□□□□ -2.22
GPC3P51654 AL513423.1-201ENST00000621695 132 ntBASIC1.17□□□□□ -2.22
GPC3P51654 MIR6079-201ENST00000635807 62 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms