Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 RNU2-56P-201ENST00000516826 190 ntBASIC1.45□□□□□ -2.18
RAB28P51157 RNU2-12P-201ENST00000517216 168 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC006600.1-201ENST00000572529 153 ntBASIC1.45□□□□□ -2.18
RAB28P51157 MIR4659A-201ENST00000580269 81 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC091178.2-201ENST00000584401 117 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC005176.2-201ENST00000596933 147 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC006380.1-201ENST00000603598 186 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
RAB28P51157 Y_RNA.804-201ENST00000615262 101 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC073349.3-201ENST00000617616 186 ntBASIC1.45□□□□□ -2.18
RAB28P51157 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.45□□□□□ -2.18
RAB28P51157 SNORD3E-202ENST00000627253 216 ntBASIC1.45□□□□□ -2.18
RAB28P51157 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
RAB28P51157 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RAB28P51157 SNORD115-30-201ENST00000364117 82 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-20P-201ENST00000384106 107 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-136P-201ENST00000384663 107 ntBASIC1.44□□□□□ -2.18
RAB28P51157 MIR562-201ENST00000384894 95 ntBASIC1.44□□□□□ -2.18
RAB28P51157 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.44□□□□□ -2.18
RAB28P51157 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
RAB28P51157 AL117351.2-201ENST00000513571 157 ntBASIC1.44□□□□□ -2.18
RAB28P51157 Y_RNA.661-201ENST00000516003 99 ntBASIC1.44□□□□□ -2.18
RAB28P51157 Y_RNA.675-201ENST00000516389 149 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-1291P-201ENST00000516591 104 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-63P-201ENST00000516690 95 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-341P-201ENST00000516973 96 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU1-92P-201ENST00000517017 135 ntBASIC1.44□□□□□ -2.18
RAB28P51157 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
RAB28P51157 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
RAB28P51157 VN1R91P-201ENST00000594377 169 ntBASIC1.44□□□□□ -2.18
RAB28P51157 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
RAB28P51157 AL513423.1-201ENST00000621695 132 ntBASIC1.44□□□□□ -2.18
RAB28P51157 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.44□□□□□ -2.18
RAB28P51157 U6.92-201ENST00000636464 89 ntBASIC1.44□□□□□ -2.18
RAB28P51157 RNU6-1115P-201ENST00000362490 106 ntBASIC1.43□□□□□ -2.18
RAB28P51157 SNORD114-7-201ENST00000362520 77 ntBASIC1.43□□□□□ -2.18
RAB28P51157 Y_RNA.27-201ENST00000362540 103 ntBASIC1.43□□□□□ -2.18
RAB28P51157 Y_RNA.101-201ENST00000363154 102 ntBASIC1.43□□□□□ -2.18
RAB28P51157 RNU6-626P-201ENST00000363354 107 ntBASIC1.43□□□□□ -2.18
RAB28P51157 RNU6-117P-201ENST00000365415 107 ntBASIC1.43□□□□□ -2.18
RAB28P51157 AP1B1P2-201ENST00000416196 106 ntBASIC1.43□□□□□ -2.18
RAB28P51157 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
RAB28P51157 AC009474.2-201ENST00000451383 136 ntBASIC1.43□□□□□ -2.18
RAB28P51157 RNU6-1053P-201ENST00000515930 101 ntBASIC1.43□□□□□ -2.18
RAB28P51157 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.43□□□□□ -2.18
RAB28P51157 MIR4272-201ENST00000635924 64 ntBASIC1.43□□□□□ -2.18
RAB28P51157 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RAB28P51157 SNORA1B-201ENST00000362535 133 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC233266.1-201ENST00000454518 96 ntBASIC1.42□□□□□ -2.18
RAB28P51157 MTND3P22-201ENST00000510932 243 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
RAB28P51157 AP002004.2-201ENST00000531656 154 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC242852.1-201ENST00000612151 96 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC240442.1-201ENST00000616055 283 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC104985.2-201ENST00000620598 500 ntBASIC1.42□□□□□ -2.18
RAB28P51157 AC244015.1-201ENST00000622301 99 ntBASIC1.42□□□□□ -2.18
RAB28P51157 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RAB28P51157 RNU4-13P-201ENST00000364019 141 ntBASIC1.41□□□□□ -2.18
RAB28P51157 Y_RNA.361-201ENST00000365515 120 ntBASIC1.41□□□□□ -2.18
RAB28P51157 RNU6-505P-201ENST00000384427 107 ntBASIC1.41□□□□□ -2.18
RAB28P51157 Y_RNA.496-201ENST00000384444 101 ntBASIC1.41□□□□□ -2.18
RAB28P51157 MIR660-201ENST00000385235 97 ntBASIC1.41□□□□□ -2.18
RAB28P51157 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
RAB28P51157 AL031003.1-201ENST00000404229 172 ntBASIC1.41□□□□□ -2.18
RAB28P51157 RNU2-54P-201ENST00000410299 190 ntBASIC1.41□□□□□ -2.18
RAB28P51157 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
RAB28P51157 AF228730.4-201ENST00000421457 183 ntBASIC1.41□□□□□ -2.18
RAB28P51157 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
RAB28P51157 SNORA70.12-201ENST00000516084 153 ntBASIC1.41□□□□□ -2.18
RAB28P51157 RNU6-155P-201ENST00000516347 100 ntBASIC1.41□□□□□ -2.18
RAB28P51157 MIR4778-201ENST00000577635 80 ntBASIC1.41□□□□□ -2.18
RAB28P51157 MIR4795-201ENST00000584182 89 ntBASIC1.41□□□□□ -2.18
RAB28P51157 AC092447.9-201ENST00000603395 144 ntBASIC1.41□□□□□ -2.18
RAB28P51157 AC106754.2-201ENST00000623006 233 ntBASIC1.41□□□□□ -2.18
RAB28P51157 ZNF209P-201ENST00000593450 2304 ntBASIC1.4□□□□□ -2.18
RAB28P51157 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
RAB28P51157 RNU4-73P-201ENST00000363164 141 ntBASIC1.4□□□□□ -2.19
RAB28P51157 RNU6-324P-201ENST00000363957 106 ntBASIC1.4□□□□□ -2.19
RAB28P51157 MIR520G-201ENST00000385064 90 ntBASIC1.4□□□□□ -2.19
RAB28P51157 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.4□□□□□ -2.19
RAB28P51157 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB28P51157 CALM2P4-201ENST00000430810 426 ntBASIC1.4□□□□□ -2.19
RAB28P51157 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB28P51157 AC092473.1-201ENST00000441098 221 ntBASIC1.4□□□□□ -2.19
RAB28P51157 RNA5SP168-201ENST00000516642 112 ntBASIC1.4□□□□□ -2.19
RAB28P51157 RNU7-28P-201ENST00000516759 62 ntBASIC1.4□□□□□ -2.19
RAB28P51157 RNU6-1096P-201ENST00000517089 102 ntBASIC1.4□□□□□ -2.19
RAB28P51157 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.4□□□□□ -2.19
RAB28P51157 AL512310.8-201ENST00000550183 120 ntBASIC1.4□□□□□ -2.19
RAB28P51157 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
RAB28P51157 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
RAB28P51157 AC005592.1-201ENST00000566527 1640 ntBASIC1.4□□□□□ -2.19
RAB28P51157 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
RAB28P51157 Y_RNA.39-201ENST00000362620 98 ntBASIC1.39□□□□□ -2.19
RAB28P51157 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
RAB28P51157 RNU5A-5P-201ENST00000411054 116 ntBASIC1.39□□□□□ -2.19
RAB28P51157 OR9P1P-201ENST00000496431 281 ntBASIC1.39□□□□□ -2.19
RAB28P51157 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.39□□□□□ -2.19
RAB28P51157 RNU6-1337P-201ENST00000516525 95 ntBASIC1.39□□□□□ -2.19
RAB28P51157 CYP3A52P-201ENST00000563326 91 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms