Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL161788.1-201ENST00000441805 169 ntBASIC2.52□□□□□ -2.01
CLK3P49761 AL135938.1-201ENST00000443141 297 ntBASIC2.52□□□□□ -2.01
CLK3P49761 HSPE1P13-201ENST00000451143 297 ntBASIC2.52□□□□□ -2.01
CLK3P49761 RNU7-115P-201ENST00000516433 55 ntBASIC2.52□□□□□ -2.01
CLK3P49761 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.52□□□□□ -2.01
CLK3P49761 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
CLK3P49761 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.52□□□□□ -2.01
CLK3P49761 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.52□□□□□ -2.01
CLK3P49761 MIR548AY-201ENST00000617669 107 ntBASIC2.52□□□□□ -2.01
CLK3P49761 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLK3P49761 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLK3P49761 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLK3P49761 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLK3P49761 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
CLK3P49761 ZNF702P-202ENST00000434269 1966 ntBASIC2.51□□□□□ -2.01
CLK3P49761 SNORD32B-201ENST00000364460 84 ntBASIC2.51□□□□□ -2.01
CLK3P49761 RNU6-1056P-201ENST00000383996 107 ntBASIC2.51□□□□□ -2.01
CLK3P49761 Y_RNA.521-201ENST00000384560 114 ntBASIC2.51□□□□□ -2.01
CLK3P49761 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLK3P49761 RNU6-460P-201ENST00000391158 108 ntBASIC2.51□□□□□ -2.01
CLK3P49761 MIR873-201ENST00000401120 77 ntBASIC2.51□□□□□ -2.01
CLK3P49761 SNORA36B-201ENST00000410438 131 ntBASIC2.51□□□□□ -2.01
CLK3P49761 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AC003685.2-201ENST00000422795 395 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.51□□□□□ -2.01
CLK3P49761 AC105272.1-201ENST00000438604 198 ntBASIC2.51□□□□□ -2.01
CLK3P49761 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK3P49761 RPL23AP7-203ENST00000449021 469 ntBASIC2.51□□□□□ -2.01
CLK3P49761 HMGN2P9-201ENST00000476875 229 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AC117454.1-201ENST00000491120 168 ntBASIC2.51□□□□□ -2.01
CLK3P49761 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK3P49761 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.51□□□□□ -2.01
CLK3P49761 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
CLK3P49761 RN7SKP179-201ENST00000516126 217 ntBASIC2.51□□□□□ -2.01
CLK3P49761 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AP001328.1-201ENST00000528550 176 ntBASIC2.51□□□□□ -2.01
CLK3P49761 U7.2-201ENST00000607576 63 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK3P49761 AC006386.2-201ENST00000624491 75 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AC012005.1-201ENST00000624575 75 ntBASIC2.51□□□□□ -2.01
CLK3P49761 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.51□□□□□ -2.01
CLK3P49761 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLK3P49761 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLK3P49761 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.5□□□□□ -2.01
CLK3P49761 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLK3P49761 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLK3P49761 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
CLK3P49761 CENPCP1-201ENST00000533085 2578 ntBASIC2.5□□□□□ -2.01
CLK3P49761 RNA5SP125-201ENST00000364843 120 ntBASIC2.5□□□□□ -2.01
CLK3P49761 MIR518C-201ENST00000384822 101 ntBASIC2.5□□□□□ -2.01
CLK3P49761 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
CLK3P49761 SNORA75.5-201ENST00000391291 81 ntBASIC2.5□□□□□ -2.01
CLK3P49761 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
CLK3P49761 RNU6-383P-201ENST00000410864 94 ntBASIC2.5□□□□□ -2.01
CLK3P49761 RPL36AP21-201ENST00000490372 323 ntBASIC2.5□□□□□ -2.01
CLK3P49761 RNA5SP402-201ENST00000517148 110 ntBASIC2.5□□□□□ -2.01
CLK3P49761 AC109329.2-201ENST00000519658 482 ntBASIC2.5□□□□□ -2.01
CLK3P49761 AP003357.1-201ENST00000604497 148 ntBASIC2.5□□□□□ -2.01
CLK3P49761 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
CLK3P49761 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
CLK3P49761 AC068647.2-201ENST00000637380 353 ntBASIC2.5□□□□□ -2.01
CLK3P49761 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
CLK3P49761 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLK3P49761 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLK3P49761 Y_RNA.124-201ENST00000363339 93 ntBASIC2.49□□□□□ -2.01
CLK3P49761 Y_RNA.251-201ENST00000364551 99 ntBASIC2.49□□□□□ -2.01
CLK3P49761 RNU6-1323P-201ENST00000384025 107 ntBASIC2.49□□□□□ -2.01
CLK3P49761 RNU6-1274P-201ENST00000384557 107 ntBASIC2.49□□□□□ -2.01
CLK3P49761 MIR95-201ENST00000385072 81 ntBASIC2.49□□□□□ -2.01
CLK3P49761 AL355796.1-201ENST00000406706 323 ntBASIC2.49□□□□□ -2.01
CLK3P49761 AC010154.1-201ENST00000425857 269 ntBASIC2.49□□□□□ -2.01
CLK3P49761 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
CLK3P49761 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
CLK3P49761 RNU6-1337P-201ENST00000516525 95 ntBASIC2.49□□□□□ -2.01
CLK3P49761 RNU5F-4P-201ENST00000516581 114 ntBASIC2.49□□□□□ -2.01
CLK3P49761 RNU2-56P-201ENST00000516826 190 ntBASIC2.49□□□□□ -2.01
CLK3P49761 AC127455.1-201ENST00000565496 145 ntBASIC2.49□□□□□ -2.01
CLK3P49761 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLK3P49761 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
CLK3P49761 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CLK3P49761 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLK3P49761 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-271P-201ENST00000363858 105 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-597P-201ENST00000365620 102 ntBASIC2.48□□□□□ -2.01
CLK3P49761 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.48□□□□□ -2.01
CLK3P49761 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-1072P-201ENST00000384703 107 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-443P-201ENST00000384780 107 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
CLK3P49761 MIR300-201ENST00000401138 83 ntBASIC2.48□□□□□ -2.01
CLK3P49761 MIR1278-201ENST00000408753 81 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-588P-201ENST00000410281 105 ntBASIC2.48□□□□□ -2.01
CLK3P49761 AL121890.1-201ENST00000435457 205 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU6-1098P-201ENST00000516772 96 ntBASIC2.48□□□□□ -2.01
CLK3P49761 RNU7-116P-201ENST00000516940 62 ntBASIC2.48□□□□□ -2.01
CLK3P49761 AC090049.2-201ENST00000550377 109 ntBASIC2.48□□□□□ -2.01
CLK3P49761 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.48□□□□□ -2.01
CLK3P49761 SNORA27.1-201ENST00000362604 124 ntBASIC2.47□□□□□ -2.01
CLK3P49761 RNA5SP496-201ENST00000391240 109 ntBASIC2.47□□□□□ -2.01
CLK3P49761 NDUFB4P4-201ENST00000404822 243 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms