Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 7SK.10-201ENST00000621414 298 ntBASIC1.94□□□□□ -2.1
CENPAP49450 AC127459.3-201ENST00000624328 466 ntBASIC1.94□□□□□ -2.1
CENPAP49450 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CENPAP49450 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
CENPAP49450 SNORA25.1-201ENST00000362326 128 ntBASIC1.93□□□□□ -2.1
CENPAP49450 SNORD114-7-201ENST00000362520 77 ntBASIC1.93□□□□□ -2.1
CENPAP49450 Y_RNA.288-201ENST00000364854 92 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNU6-574P-201ENST00000384265 107 ntBASIC1.93□□□□□ -2.1
CENPAP49450 Y_RNA.556-201ENST00000384677 113 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNU6-376P-201ENST00000384731 106 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNU2-61P-201ENST00000411069 191 ntBASIC1.93□□□□□ -2.1
CENPAP49450 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
CENPAP49450 AC097462.1-201ENST00000514125 324 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNU6-1278P-201ENST00000516130 107 ntBASIC1.93□□□□□ -2.1
CENPAP49450 RNU6-1338P-201ENST00000516328 91 ntBASIC1.93□□□□□ -2.1
CENPAP49450 SCARNA16.3-201ENST00000516595 184 ntBASIC1.93□□□□□ -2.1
CENPAP49450 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
CENPAP49450 RPL21P9-201ENST00000556149 474 ntBASIC1.93□□□□□ -2.1
CENPAP49450 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
CENPAP49450 U4.1-201ENST00000620349 87 ntBASIC1.93□□□□□ -2.1
CENPAP49450 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CENPAP49450 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CENPAP49450 AL391987.6-201ENST00000305671 199 ntBASIC1.92□□□□□ -2.1
CENPAP49450 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CENPAP49450 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
CENPAP49450 Y_RNA.237-201ENST00000364439 102 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-326P-201ENST00000365480 107 ntBASIC1.92□□□□□ -2.1
CENPAP49450 Y_RNA.361-201ENST00000365515 120 ntBASIC1.92□□□□□ -2.1
CENPAP49450 Y_RNA.418-201ENST00000384029 102 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-463P-201ENST00000384340 107 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-136P-201ENST00000384663 107 ntBASIC1.92□□□□□ -2.1
CENPAP49450 SNORA48.1-201ENST00000390879 135 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-1248P-201ENST00000391096 64 ntBASIC1.92□□□□□ -2.1
CENPAP49450 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
CENPAP49450 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
CENPAP49450 MTND4LP30-201ENST00000454092 297 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU7-99P-201ENST00000516271 62 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-1337P-201ENST00000516525 95 ntBASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-63P-201ENST00000516690 95 ntBASIC1.92□□□□□ -2.1
CENPAP49450 MIR4503-201ENST00000582187 83 ntBASIC1.92□□□□□ -2.1
CENPAP49450 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.92□□□□□ -2.1
CENPAP49450 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.92□□□□□ -2.1
CENPAP49450 RNU6-472P-201ENST00000384299 107 ntBASIC1.91□□□□□ -2.1
CENPAP49450 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.91□□□□□ -2.1
CENPAP49450 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.91□□□□□ -2.1
CENPAP49450 AC024995.1-201ENST00000523014 93 ntBASIC1.91□□□□□ -2.1
CENPAP49450 AC104984.5-201ENST00000586878 94 ntBASIC1.91□□□□□ -2.1
CENPAP49450 AC073413.2-201ENST00000604332 360 ntBASIC1.91□□□□□ -2.1
CENPAP49450 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.91□□□□□ -2.1
CENPAP49450 AL590808.1-201ENST00000618696 141 ntBASIC1.91□□□□□ -2.1
CENPAP49450 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.91□□□□□ -2.1
CENPAP49450 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CENPAP49450 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CENPAP49450 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.9□□□□□ -2.11
CENPAP49450 Y_RNA.136-201ENST00000363444 102 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNU6-1019P-201ENST00000364424 107 ntBASIC1.9□□□□□ -2.11
CENPAP49450 Y_RNA.341-201ENST00000365341 102 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNA5SP338-201ENST00000410495 85 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNU2-7P-201ENST00000410794 178 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNU4-53P-201ENST00000410828 140 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
CENPAP49450 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.9□□□□□ -2.11
CENPAP49450 MTCO1P5-201ENST00000433573 344 ntBASIC1.9□□□□□ -2.11
CENPAP49450 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
CENPAP49450 TRBV12-1-201ENST00000479785 344 ntBASIC1.9□□□□□ -2.11
CENPAP49450 AL163195.1-201ENST00000496941 348 ntBASIC1.9□□□□□ -2.11
CENPAP49450 SERF1AP1-201ENST00000514575 187 ntBASIC1.9□□□□□ -2.11
CENPAP49450 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
CENPAP49450 AC091544.4-201ENST00000555268 342 ntBASIC1.9□□□□□ -2.11
CENPAP49450 MIR3149-201ENST00000584629 83 ntBASIC1.9□□□□□ -2.11
CENPAP49450 AP001282.2-201ENST00000616149 309 ntBASIC1.9□□□□□ -2.11
CENPAP49450 RNU6-702P-201ENST00000364982 107 ntBASIC1.89□□□□□ -2.11
CENPAP49450 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.89□□□□□ -2.11
CENPAP49450 RNU11-5P-201ENST00000391216 129 ntBASIC1.89□□□□□ -2.11
CENPAP49450 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.89□□□□□ -2.11
CENPAP49450 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.89□□□□□ -2.11
CENPAP49450 RNU6-191P-201ENST00000516295 94 ntBASIC1.89□□□□□ -2.11
CENPAP49450 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.89□□□□□ -2.11
CENPAP49450 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.89□□□□□ -2.11
CENPAP49450 MIR5002-201ENST00000584713 97 ntBASIC1.89□□□□□ -2.11
CENPAP49450 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
CENPAP49450 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CENPAP49450 Y_RNA.172-201ENST00000363765 102 ntBASIC1.88□□□□□ -2.11
CENPAP49450 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
CENPAP49450 Y_RNA.452-201ENST00000384202 108 ntBASIC1.88□□□□□ -2.11
CENPAP49450 RNA5SP511-201ENST00000410487 115 ntBASIC1.88□□□□□ -2.11
CENPAP49450 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
CENPAP49450 HSPE1P21-201ENST00000438283 308 ntBASIC1.88□□□□□ -2.11
CENPAP49450 AC069257.2-201ENST00000441819 155 ntBASIC1.88□□□□□ -2.11
CENPAP49450 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
CENPAP49450 RNU6-717P-201ENST00000459076 104 ntBASIC1.88□□□□□ -2.11
CENPAP49450 AC091959.1-201ENST00000495857 238 ntBASIC1.88□□□□□ -2.11
CENPAP49450 RNU7-128P-201ENST00000517247 62 ntBASIC1.88□□□□□ -2.11
CENPAP49450 CBX3P4-201ENST00000538909 354 ntBASIC1.88□□□□□ -2.11
CENPAP49450 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.88□□□□□ -2.11
CENPAP49450 U6.108-201ENST00000637764 58 ntBASIC1.88□□□□□ -2.11
CENPAP49450 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms