Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORA44.1-201ENST00000517031 108 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC084364.2-201ENST00000546924 395 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.64□□□□□ -2.15
NKX2-1P43699 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.64□□□□□ -2.15
NKX2-1P43699 AL359075.3-201ENST00000613288 217 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 AL078604.3-201ENST00000615580 211 ntBASIC1.64□□□□□ -2.15
NKX2-1P43699 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NKX2-1P43699 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
NKX2-1P43699 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NKX2-1P43699 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
NKX2-1P43699 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NKX2-1P43699 Y_RNA.456-201ENST00000384232 111 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 Y_RNA.541-201ENST00000384640 113 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 Y_RNA.569-201ENST00000384749 103 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 RNU6-713P-201ENST00000384761 107 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 MIR562-201ENST00000384894 95 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NKX2-1P43699 RNU6-360P-201ENST00000390944 104 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 RPL21P38-201ENST00000418090 167 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 AL356320.1-201ENST00000429616 163 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 AC097462.1-201ENST00000514125 324 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 Y_RNA.668-201ENST00000516233 93 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 RNU2-31P-201ENST00000516954 155 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.63□□□□□ -2.15
NKX2-1P43699 AL358944.1-201ENST00000528537 144 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 AP001282.2-201ENST00000616149 309 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 U4.1-201ENST00000620349 87 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.63□□□□□ -2.15
NKX2-1P43699 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
NKX2-1P43699 RNU4-82P-201ENST00000362443 140 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 Y_RNA.310-201ENST00000365063 113 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 Y_RNA.329-201ENST00000365209 107 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 Y_RNA.452-201ENST00000384202 108 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 Y_RNA.562-201ENST00000384695 113 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 RNU6-417P-201ENST00000384712 107 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR215-201ENST00000384858 110 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 SNORD58.1-201ENST00000391313 66 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR1302-6-201ENST00000408466 90 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 RNU4-30P-201ENST00000410245 143 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.62□□□□□ -2.15
NKX2-1P43699 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.62□□□□□ -2.15
NKX2-1P43699 OOSP1P1-201ENST00000423265 274 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 POLR2KP2-201ENST00000438155 177 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 RNU7-94P-201ENST00000459576 63 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NKX2-1P43699 RNU6-1338P-201ENST00000516328 91 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 RNU1-142P-201ENST00000516682 145 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 AC136628.3-201ENST00000521868 290 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 AC004817.2-201ENST00000561794 651 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR4513-201ENST00000581077 86 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR4438-201ENST00000585271 93 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR6873-201ENST00000622788 63 ntBASIC1.62□□□□□ -2.15
NKX2-1P43699 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NKX2-1P43699 MIR449A-201ENST00000362113 91 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 Y_RNA.193-201ENST00000363979 102 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 Y_RNA.418-201ENST00000384029 102 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 RNU6-505P-201ENST00000384427 107 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 RNU6-102P-201ENST00000384485 104 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 MT-TW-201ENST00000387382 68 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 SNORA53-201ENST00000391141 249 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.61□□□□□ -2.15
NKX2-1P43699 UBE2DNL-203ENST00000474922 222 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 TRBVB-201ENST00000477100 408 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 SERF1AP1-201ENST00000514575 187 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 RNU6-191P-201ENST00000516295 94 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 SNORA31.17-201ENST00000516953 127 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 AC091178.2-201ENST00000584401 117 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 7SK.10-201ENST00000621414 298 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.61□□□□□ -2.15
NKX2-1P43699 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NKX2-1P43699 RNU6-1323P-201ENST00000384025 107 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 RNU6-950P-201ENST00000384651 107 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 AL162725.1-201ENST00000435405 301 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
NKX2-1P43699 SNORD127-201ENST00000458892 86 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 U8.19-201ENST00000459095 133 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.6□□□□□ -2.15
NKX2-1P43699 RNU6-1278P-201ENST00000516130 107 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 SNORA27.4-201ENST00000516650 95 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 MIR4503-201ENST00000582187 83 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
NKX2-1P43699 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.6□□□□□ -2.15
NKX2-1P43699 AC245060.5-201ENST00000610778 3293 ntBASIC1.6□□□□□ -2.15
NKX2-1P43699 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
NKX2-1P43699 Y_RNA.144-201ENST00000363521 113 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 MT-TG-201ENST00000387429 68 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
NKX2-1P43699 RNA5SP323-201ENST00000391094 133 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 RNA5SP467-201ENST00000391274 118 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 RNU2-7P-201ENST00000410794 178 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.59□□□□□ -2.15
NKX2-1P43699 MTCO1P5-201ENST00000433573 344 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 RPS27P22-201ENST00000478056 241 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 RNU7-172P-201ENST00000517125 64 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 IGKV3-31-201ENST00000523109 329 ntBASIC1.59□□□□□ -2.15
NKX2-1P43699 MIR4435-1-201ENST00000582552 80 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms