Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CYCSP26-201ENST00000534107 320 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXC12P31275 MIR2681-201ENST00000581814 105 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 MIR3162-201ENST00000581818 82 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXC12P31275 AL031274.2-201ENST00000599419 203 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AL049861.1-201ENST00000603130 150 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AP001485.1-201ENST00000604799 199 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AC242852.1-201ENST00000612151 96 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 Y_RNA.778-201ENST00000620203 90 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AC244015.1-201ENST00000622301 99 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 AC073476.4-201ENST00000628409 72 ntBASIC2.77□□□□□ -1.97
HOXC12P31275 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HOXC12P31275 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HOXC12P31275 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HOXC12P31275 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HOXC12P31275 RNA5SP432-201ENST00000362480 116 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 RNA5SP493-201ENST00000364115 91 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 Y_RNA.337-201ENST00000365312 102 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 Y_RNA.488-201ENST00000384403 102 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 MIR520G-201ENST00000385064 90 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 RNA5SP323-201ENST00000391094 133 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 RNU11-5P-201ENST00000391216 129 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 BMS1P22-201ENST00000414726 313 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 SNRPGP8-201ENST00000454064 226 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 AC010401.1-201ENST00000463867 348 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 RN7SL636P-201ENST00000497504 294 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.76□□□□□ -1.97
HOXC12P31275 RPL23AP91-201ENST00000569211 455 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 MIR2682-201ENST00000580305 110 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 MIR5194-201ENST00000582634 120 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 AL353149.1-201ENST00000610667 244 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 FO624990.1-201ENST00000636373 85 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 AC132825.6-201ENST00000638861 357 ntBASIC2.76□□□□□ -1.97
HOXC12P31275 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXC12P31275 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXC12P31275 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HOXC12P31275 MAPK10-266ENST00000641066 6555 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC12P31275 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC12P31275 RNA5SP383-201ENST00000362934 120 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 Y_RNA.215-201ENST00000364204 112 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 Y_RNA.343-201ENST00000365354 112 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 RNU6-643P-201ENST00000384018 107 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 RN7SKP101-201ENST00000411376 320 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 AC063976.3-201ENST00000426849 329 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC12P31275 AC023449.1-201ENST00000454464 154 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 RNU7-128P-201ENST00000517247 62 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 NDUFB9P3-201ENST00000521269 501 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC12P31275 MIR3126-201ENST00000577443 74 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 AC022202.1-201ENST00000613515 211 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.75□□□□□ -1.97
HOXC12P31275 MIR6715A-201ENST00000615929 79 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 AC012640.5-201ENST00000623897 319 ntBASIC2.75□□□□□ -1.97
HOXC12P31275 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HOXC12P31275 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC12P31275 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.75□□□□□ -1.97
HOXC12P31275 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HOXC12P31275 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC12P31275 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC12P31275 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
HOXC12P31275 SNORD50.2-201ENST00000365465 70 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC12P31275 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 AL109933.2-201ENST00000452651 260 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 AC008885.1-201ENST00000514930 301 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 RNU1-104P-201ENST00000517280 175 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC12P31275 DNAJC19P2-201ENST00000593340 302 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC12P31275 MIR622-201ENST00000638396 96 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC12P31275 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC12P31275 AC100821.1-201ENST00000523153 2479 ntBASIC2.74□□□□□ -1.97
HOXC12P31275 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC12P31275 RNU6-862P-201ENST00000362804 105 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNU6-23P-201ENST00000363283 107 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNA5SP393-201ENST00000363423 117 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORA33-201ENST00000363664 130 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORD45.3-201ENST00000363836 72 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNU6-1164P-201ENST00000364428 107 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORA71.1-201ENST00000364523 117 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 Y_RNA.267-201ENST00000364679 109 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNU6-1080P-201ENST00000383982 107 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORA8-201ENST00000384574 139 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 AL117342.1-201ENST00000404861 406 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORA79-201ENST00000408376 140 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 AC007064.1-201ENST00000412238 351 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 AL606753.1-201ENST00000427435 87 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNA5SP356-201ENST00000515972 94 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 RNU6-1291P-201ENST00000516591 104 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 SNORA64.4-201ENST00000516632 81 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC12P31275 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC12P31275 U6.108-201ENST00000637764 58 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 AL355596.1-201ENST00000565399 3996 ntBASIC2.73□□□□□ -1.97
HOXC12P31275 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms