Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RXRBP28702 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RXRBP28702 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RXRBP28702 RNA5SP383-201ENST00000362934 120 ntBASIC3.53□□□□□ -1.84
RXRBP28702 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RXRBP28702 RNU6-484P-201ENST00000384016 107 ntBASIC3.53□□□□□ -1.84
RXRBP28702 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RXRBP28702 RNA5SP38-201ENST00000410750 119 ntBASIC3.53□□□□□ -1.84
RXRBP28702 RNU6-168P-201ENST00000516189 101 ntBASIC3.53□□□□□ -1.84
RXRBP28702 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RXRBP28702 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RXRBP28702 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
RXRBP28702 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RXRBP28702 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.52□□□□□ -1.85
RXRBP28702 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RXRBP28702 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
RXRBP28702 RNU6-198P-201ENST00000384258 104 ntBASIC3.52□□□□□ -1.85
RXRBP28702 MIR586-201ENST00000385035 97 ntBASIC3.52□□□□□ -1.85
RXRBP28702 RN7SKP101-201ENST00000411376 320 ntBASIC3.52□□□□□ -1.85
RXRBP28702 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.52□□□□□ -1.85
RXRBP28702 SRIP1-201ENST00000489235 288 ntBASIC3.52□□□□□ -1.85
RXRBP28702 RNA5SP282-201ENST00000516355 108 ntBASIC3.52□□□□□ -1.85
RXRBP28702 RNU2-60P-201ENST00000517290 128 ntBASIC3.52□□□□□ -1.85
RXRBP28702 NDUFA5P6-201ENST00000542110 379 ntBASIC3.52□□□□□ -1.85
RXRBP28702 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.52□□□□□ -1.85
RXRBP28702 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.52□□□□□ -1.85
RXRBP28702 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.52□□□□□ -1.85
RXRBP28702 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RXRBP28702 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
RXRBP28702 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RXRBP28702 SNORD114-19-201ENST00000363072 75 ntBASIC3.51□□□□□ -1.85
RXRBP28702 RNU6-1210P-201ENST00000363775 107 ntBASIC3.51□□□□□ -1.85
RXRBP28702 RNU6-1323P-201ENST00000384025 107 ntBASIC3.51□□□□□ -1.85
RXRBP28702 MIR873-201ENST00000401120 77 ntBASIC3.51□□□□□ -1.85
RXRBP28702 RNU2-49P-201ENST00000410666 184 ntBASIC3.51□□□□□ -1.85
RXRBP28702 Z82209.1-201ENST00000422141 2135 ntBASIC3.51□□□□□ -1.85
RXRBP28702 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.51□□□□□ -1.85
RXRBP28702 AC245047.4-201ENST00000433189 144 ntBASIC3.51□□□□□ -1.85
RXRBP28702 AC009969.1-201ENST00000438726 172 ntBASIC3.51□□□□□ -1.85
RXRBP28702 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.51□□□□□ -1.85
RXRBP28702 HMGN2P9-201ENST00000476875 229 ntBASIC3.51□□□□□ -1.85
RXRBP28702 AC090142.3-201ENST00000519012 385 ntBASIC3.51□□□□□ -1.85
RXRBP28702 Y_RNA.757-201ENST00000578934 114 ntBASIC3.51□□□□□ -1.85
RXRBP28702 AC073476.4-201ENST00000628409 72 ntBASIC3.51□□□□□ -1.85
RXRBP28702 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.51□□□□□ -1.85
RXRBP28702 AC069528.2-201ENST00000624849 1991 ntBASIC3.51□□□□□ -1.85
RXRBP28702 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RXRBP28702 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RXRBP28702 snoU2_19.1-201ENST00000362361 80 ntBASIC3.5□□□□□ -1.85
RXRBP28702 RNU6-1305P-201ENST00000364353 104 ntBASIC3.5□□□□□ -1.85
RXRBP28702 RNU6-197P-201ENST00000516680 100 ntBASIC3.5□□□□□ -1.85
RXRBP28702 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.5□□□□□ -1.85
RXRBP28702 AL159152.1-201ENST00000635019 2587 ntBASIC3.5□□□□□ -1.85
RXRBP28702 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.49□□□□□ -1.85
RXRBP28702 AC010889.1-201ENST00000566193 2666 ntBASIC3.49□□□□□ -1.85
RXRBP28702 Y_RNA.35-201ENST00000362601 101 ntBASIC3.49□□□□□ -1.85
RXRBP28702 RNU6-655P-201ENST00000362858 107 ntBASIC3.49□□□□□ -1.85
RXRBP28702 RNU6-508P-201ENST00000363231 103 ntBASIC3.49□□□□□ -1.85
RXRBP28702 Y_RNA.114-201ENST00000363265 113 ntBASIC3.49□□□□□ -1.85
RXRBP28702 Y_RNA.120-201ENST00000363304 110 ntBASIC3.49□□□□□ -1.85
RXRBP28702 MIR518C-201ENST00000384822 101 ntBASIC3.49□□□□□ -1.85
RXRBP28702 Y_RNA.617-201ENST00000410920 90 ntBASIC3.49□□□□□ -1.85
RXRBP28702 MLLT10P1-201ENST00000418346 262 ntBASIC3.49□□□□□ -1.85
RXRBP28702 Y_RNA.692-201ENST00000516627 105 ntBASIC3.49□□□□□ -1.85
RXRBP28702 SNORA64.4-201ENST00000516632 81 ntBASIC3.49□□□□□ -1.85
RXRBP28702 SCARNA20.6-201ENST00000517251 106 ntBASIC3.49□□□□□ -1.85
RXRBP28702 POLR3GP1-201ENST00000594073 261 ntBASIC3.49□□□□□ -1.85
RXRBP28702 RPL30P11-203ENST00000598995 310 ntBASIC3.49□□□□□ -1.85
RXRBP28702 AL670379.3-201ENST00000605040 251 ntBASIC3.49□□□□□ -1.85
RXRBP28702 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
RXRBP28702 SNORA27.1-201ENST00000362604 124 ntBASIC3.48□□□□□ -1.85
RXRBP28702 SNORD56.3-201ENST00000363507 71 ntBASIC3.48□□□□□ -1.85
RXRBP28702 RNU6-674P-201ENST00000363831 107 ntBASIC3.48□□□□□ -1.85
RXRBP28702 SNORD32B-201ENST00000364460 84 ntBASIC3.48□□□□□ -1.85
RXRBP28702 SNORA51.4-201ENST00000364993 124 ntBASIC3.48□□□□□ -1.85
RXRBP28702 SNORD58C-201ENST00000365223 64 ntBASIC3.48□□□□□ -1.85
RXRBP28702 Y_RNA.587-201ENST00000391210 103 ntBASIC3.48□□□□□ -1.85
RXRBP28702 RPS12P2-201ENST00000439728 269 ntBASIC3.48□□□□□ -1.85
RXRBP28702 HMGN1P18-201ENST00000457642 277 ntBASIC3.48□□□□□ -1.85
RXRBP28702 HSPE1P18-201ENST00000517602 280 ntBASIC3.48□□□□□ -1.85
RXRBP28702 ZNF861P-201ENST00000588126 639 ntBASIC3.48□□□□□ -1.85
RXRBP28702 AC006254.2-201ENST00000603259 279 ntBASIC3.48□□□□□ -1.85
RXRBP28702 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.48□□□□□ -1.85
RXRBP28702 AC138915.1-201ENST00000565427 1685 ntBASIC3.48□□□□□ -1.85
RXRBP28702 AL356292.1-201ENST00000283110 373 ntBASIC3.47□□□□□ -1.85
RXRBP28702 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
RXRBP28702 RNU1-57P-201ENST00000384491 166 ntBASIC3.47□□□□□ -1.85
RXRBP28702 MIR7-2-201ENST00000384970 110 ntBASIC3.47□□□□□ -1.85
RXRBP28702 MIRLET7F2-201ENST00000385277 83 ntBASIC3.47□□□□□ -1.85
RXRBP28702 RNU6-750P-201ENST00000390946 107 ntBASIC3.47□□□□□ -1.85
RXRBP28702 Y_RNA.651-201ENST00000459380 103 ntBASIC3.47□□□□□ -1.85
RXRBP28702 RNU6-437P-201ENST00000459408 95 ntBASIC3.47□□□□□ -1.85
RXRBP28702 RPS26P55-201ENST00000471178 356 ntBASIC3.47□□□□□ -1.85
RXRBP28702 RNU6-1098P-201ENST00000516772 96 ntBASIC3.47□□□□□ -1.85
RXRBP28702 AL160236.1-201ENST00000556317 195 ntBASIC3.47□□□□□ -1.85
RXRBP28702 MIR5582-201ENST00000579697 68 ntBASIC3.47□□□□□ -1.85
RXRBP28702 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.47□□□□□ -1.85
RXRBP28702 SNORA50A-202ENST00000629536 136 ntBASIC3.47□□□□□ -1.85
RXRBP28702 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RXRBP28702 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms