Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CDH3P22223 RNA5SP323-201ENST00000391094 133 ntBASIC1.61□□□□□ -2.15
CDH3P22223 MIR873-201ENST00000401120 77 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RPS27P1-201ENST00000450552 247 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNA5SP20-201ENST00000515976 84 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNU7-99P-201ENST00000516271 62 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNU1-142P-201ENST00000516682 145 ntBASIC1.61□□□□□ -2.15
CDH3P22223 RNU6-1137P-201ENST00000517073 99 ntBASIC1.61□□□□□ -2.15
CDH3P22223 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.61□□□□□ -2.15
CDH3P22223 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH3P22223 MIR4680-201ENST00000580906 66 ntBASIC1.61□□□□□ -2.15
CDH3P22223 AC022441.3-201ENST00000605737 136 ntBASIC1.61□□□□□ -2.15
CDH3P22223 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH3P22223 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CDH3P22223 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CDH3P22223 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RNU6-661P-201ENST00000362409 107 ntBASIC1.6□□□□□ -2.15
CDH3P22223 Y_RNA.143-201ENST00000363520 106 ntBASIC1.6□□□□□ -2.15
CDH3P22223 Y_RNA.202-201ENST00000364083 110 ntBASIC1.6□□□□□ -2.15
CDH3P22223 SNORA33.2-201ENST00000365413 134 ntBASIC1.6□□□□□ -2.15
CDH3P22223 Y_RNA.389-201ENST00000383924 113 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RNU6-937P-201ENST00000384325 106 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RNA5SP109-201ENST00000391010 116 ntBASIC1.6□□□□□ -2.15
CDH3P22223 AL031003.1-201ENST00000404229 172 ntBASIC1.6□□□□□ -2.15
CDH3P22223 SUMO1P2-201ENST00000452524 304 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RPS26P55-201ENST00000471178 356 ntBASIC1.6□□□□□ -2.15
CDH3P22223 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH3P22223 RNA5SP458-201ENST00000516188 119 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RNU6-155P-201ENST00000516347 100 ntBASIC1.6□□□□□ -2.15
CDH3P22223 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH3P22223 AC136932.1-201ENST00000574771 208 ntBASIC1.6□□□□□ -2.15
CDH3P22223 AC022217.4-201ENST00000604389 163 ntBASIC1.6□□□□□ -2.15
CDH3P22223 RAC1P9-201ENST00000604990 392 ntBASIC1.6□□□□□ -2.15
CDH3P22223 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.6□□□□□ -2.15
CDH3P22223 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CDH3P22223 SNORD114-7-201ENST00000362520 77 ntBASIC1.59□□□□□ -2.15
CDH3P22223 RNU6-271P-201ENST00000363858 105 ntBASIC1.59□□□□□ -2.15
CDH3P22223 SNORA4.2-201ENST00000365313 147 ntBASIC1.59□□□□□ -2.15
CDH3P22223 SNORA63.7-201ENST00000365579 123 ntBASIC1.59□□□□□ -2.15
CDH3P22223 Y_RNA.462-201ENST00000384268 102 ntBASIC1.59□□□□□ -2.15
CDH3P22223 Y_RNA.527-201ENST00000384573 102 ntBASIC1.59□□□□□ -2.15
CDH3P22223 MIR1252-201ENST00000408861 65 ntBASIC1.59□□□□□ -2.15
CDH3P22223 HSPE1P9-201ENST00000440046 311 ntBASIC1.59□□□□□ -2.15
CDH3P22223 AC069257.2-201ENST00000441819 155 ntBASIC1.59□□□□□ -2.15
CDH3P22223 AC073910.1-201ENST00000445047 438 ntBASIC1.59□□□□□ -2.15
CDH3P22223 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
CDH3P22223 RNU6-397P-201ENST00000516226 104 ntBASIC1.59□□□□□ -2.15
CDH3P22223 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH3P22223 AC006380.1-201ENST00000603598 186 ntBASIC1.59□□□□□ -2.15
CDH3P22223 AC040896.1-201ENST00000613819 479 ntBASIC1.59□□□□□ -2.15
CDH3P22223 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.59□□□□□ -2.16
CDH3P22223 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CDH3P22223 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.16
CDH3P22223 RNU6-117P-201ENST00000365415 107 ntBASIC1.58□□□□□ -2.16
CDH3P22223 AC117470.1-201ENST00000381974 330 ntBASIC1.58□□□□□ -2.16
CDH3P22223 SNORD63-201ENST00000384262 68 ntBASIC1.58□□□□□ -2.16
CDH3P22223 RNU6-101P-201ENST00000410323 104 ntBASIC1.58□□□□□ -2.16
CDH3P22223 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
CDH3P22223 AC010655.3-201ENST00000478818 450 ntBASIC1.58□□□□□ -2.16
CDH3P22223 RNU6-1046P-201ENST00000516538 107 ntBASIC1.58□□□□□ -2.16
CDH3P22223 Y_RNA.713-201ENST00000517013 96 ntBASIC1.58□□□□□ -2.16
CDH3P22223 RNU7-172P-201ENST00000517125 64 ntBASIC1.58□□□□□ -2.16
CDH3P22223 Y_RNA.721-201ENST00000517207 102 ntBASIC1.58□□□□□ -2.16
CDH3P22223 AP003072.1-201ENST00000531740 145 ntBASIC1.58□□□□□ -2.16
CDH3P22223 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH3P22223 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
CDH3P22223 AC073413.2-201ENST00000604332 360 ntBASIC1.58□□□□□ -2.16
CDH3P22223 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH3P22223 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH3P22223 SNORD81.1-201ENST00000363064 77 ntBASIC1.57□□□□□ -2.16
CDH3P22223 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
CDH3P22223 Y_RNA.455-201ENST00000384230 98 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU6-505P-201ENST00000384427 107 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU2-7P-201ENST00000410794 178 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU5A-5P-201ENST00000411054 116 ntBASIC1.57□□□□□ -2.16
CDH3P22223 AC005042.3-201ENST00000453230 174 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU6-436P-201ENST00000516171 114 ntBASIC1.57□□□□□ -2.16
CDH3P22223 RNU6-897P-201ENST00000517135 105 ntBASIC1.57□□□□□ -2.16
CDH3P22223 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
CDH3P22223 AC113195.1-201ENST00000579952 141 ntBASIC1.57□□□□□ -2.16
CDH3P22223 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.57□□□□□ -2.16
CDH3P22223 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.57□□□□□ -2.16
CDH3P22223 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH3P22223 Y_RNA.105-201ENST00000363182 111 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RNU6-457P-201ENST00000363999 107 ntBASIC1.56□□□□□ -2.16
CDH3P22223 Y_RNA.326-201ENST00000365176 113 ntBASIC1.56□□□□□ -2.16
CDH3P22223 Y_RNA.331-201ENST00000365267 102 ntBASIC1.56□□□□□ -2.16
CDH3P22223 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CDH3P22223 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RNU4-30P-201ENST00000410245 143 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RNU2-61P-201ENST00000411069 191 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
CDH3P22223 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH3P22223 Y_RNA.638-201ENST00000459374 113 ntBASIC1.56□□□□□ -2.16
CDH3P22223 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
CDH3P22223 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH3P22223 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms