Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR4795-201ENST00000584182 89 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 AC091178.2-201ENST00000584401 117 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 AL513423.1-201ENST00000621695 132 ntBASIC1.43□□□□□ -2.18
ERCC2P18074 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
ERCC2P18074 ZNF209P-201ENST00000593450 2304 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 RNU6-1115P-201ENST00000362490 106 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 SNORD78.2-201ENST00000391076 69 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 SUMO1P2-201ENST00000452524 304 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.42□□□□□ -2.18
ERCC2P18074 Y_RNA.661-201ENST00000516003 99 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 RNU6-1278P-201ENST00000516130 107 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 RNU6-341P-201ENST00000516973 96 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.42□□□□□ -2.18
ERCC2P18074 AC006600.1-201ENST00000572529 153 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 SNORA28-201ENST00000606769 126 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 AC011476.5-201ENST00000615594 130 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
ERCC2P18074 Y_RNA.265-201ENST00000364677 108 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU6-117P-201ENST00000365415 107 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 Y_RNA.496-201ENST00000384444 101 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 MT-TD-201ENST00000387419 68 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU6-911P-201ENST00000516523 104 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU6-1291P-201ENST00000516591 104 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU6-1012P-201ENST00000516606 109 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU2-56P-201ENST00000516826 190 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 AL161670.1-201ENST00000554348 137 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 AC104985.2-201ENST00000620598 500 ntBASIC1.41□□□□□ -2.18
ERCC2P18074 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ERCC2P18074 SNORA1B-201ENST00000362535 133 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 SNORD115-30-201ENST00000364117 82 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 RNU6-136P-201ENST00000384663 107 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 MIR562-201ENST00000384894 95 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 MIR660-201ENST00000385235 97 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 RNU6-63P-201ENST00000516690 95 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.4□□□□□ -2.19
ERCC2P18074 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 MIR4659A-201ENST00000580269 81 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 VN1R91P-201ENST00000594377 169 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 LARP7P1-201ENST00000605576 316 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 MIR4272-201ENST00000635924 64 ntBASIC1.4□□□□□ -2.19
ERCC2P18074 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ERCC2P18074 Y_RNA.27-201ENST00000362540 103 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 RNU4-79P-201ENST00000362764 141 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 Y_RNA.101-201ENST00000363154 102 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 Y_RNA.579-201ENST00000390939 94 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.39□□□□□ -2.19
ERCC2P18074 CALM2P4-201ENST00000430810 426 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.39□□□□□ -2.19
ERCC2P18074 Y_RNA.638-201ENST00000459374 113 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 RPL30P7-201ENST00000479312 323 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 RNA5SP168-201ENST00000516642 112 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 AP002004.2-201ENST00000531656 154 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 RAB11AP2-201ENST00000545905 639 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.39□□□□□ -2.19
ERCC2P18074 AC092447.9-201ENST00000603395 144 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 AL512598.1-201ENST00000610158 273 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 AC091925.1-201ENST00000623204 462 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 U6.92-201ENST00000636464 89 ntBASIC1.39□□□□□ -2.19
ERCC2P18074 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 Y_RNA.5-201ENST00000362334 102 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 SNORD114-7-201ENST00000362520 77 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 Y_RNA.315-201ENST00000365117 102 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 Y_RNA.361-201ENST00000365515 120 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 RNU6-20P-201ENST00000384106 107 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 RNU5A-5P-201ENST00000411054 116 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
ERCC2P18074 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.38□□□□□ -2.19
ERCC2P18074 AC233266.1-201ENST00000454518 96 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 RPL39P38-201ENST00000467018 153 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AC092991.1-201ENST00000477176 376 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 OR9P1P-201ENST00000496431 281 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 MIR3664-201ENST00000579074 99 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AC006380.1-201ENST00000603598 186 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AC242852.1-201ENST00000612151 96 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AC244015.1-201ENST00000622301 99 ntBASIC1.38□□□□□ -2.19
ERCC2P18074 AC005592.1-201ENST00000566527 1640 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU6-626P-201ENST00000363354 107 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU4-76P-201ENST00000364509 141 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 Y_RNA.252-201ENST00000364556 101 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 RNU6-505P-201ENST00000384427 107 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ERCC2P18074 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
ERCC2P18074 AL603825.1-201ENST00000438481 80 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms