Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNY1P6-201ENST00000384193 109 ntBASIC3.27□□□□□ -1.89
NID1P14543 Y_RNA.466-201ENST00000384294 113 ntBASIC3.27□□□□□ -1.89
NID1P14543 MIR802-201ENST00000390235 94 ntBASIC3.27□□□□□ -1.89
NID1P14543 MIR1912-201ENST00000410389 80 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNU6-1186P-201ENST00000410429 97 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNA5SP225-201ENST00000410874 135 ntBASIC3.27□□□□□ -1.89
NID1P14543 HMGN2P34-201ENST00000437647 269 ntBASIC3.27□□□□□ -1.89
NID1P14543 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
NID1P14543 SCARNA23-201ENST00000516060 130 ntBASIC3.27□□□□□ -1.89
NID1P14543 RNU6-965P-201ENST00000516721 96 ntBASIC3.27□□□□□ -1.89
NID1P14543 U2.20-201ENST00000613956 192 ntBASIC3.27□□□□□ -1.89
NID1P14543 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.27□□□□□ -1.89
NID1P14543 MIR8058-201ENST00000615737 89 ntBASIC3.27□□□□□ -1.89
NID1P14543 AC022149.2-201ENST00000621061 203 ntBASIC3.27□□□□□ -1.89
NID1P14543 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NID1P14543 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 RNU1-105P-201ENST00000363470 161 ntBASIC3.26□□□□□ -1.89
NID1P14543 RNU1-96P-201ENST00000364163 162 ntBASIC3.26□□□□□ -1.89
NID1P14543 RNU6-813P-201ENST00000384691 107 ntBASIC3.26□□□□□ -1.89
NID1P14543 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NID1P14543 CYCSP35-201ENST00000451978 304 ntBASIC3.26□□□□□ -1.89
NID1P14543 AC106707.2-201ENST00000484182 374 ntBASIC3.26□□□□□ -1.89
NID1P14543 RNU7-123P-201ENST00000515911 60 ntBASIC3.26□□□□□ -1.89
NID1P14543 AC026333.2-201ENST00000542164 106 ntBASIC3.26□□□□□ -1.89
NID1P14543 AL359075.3-201ENST00000613288 217 ntBASIC3.26□□□□□ -1.89
NID1P14543 AC006111.3-201ENST00000622137 383 ntBASIC3.26□□□□□ -1.89
NID1P14543 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.26□□□□□ -1.89
NID1P14543 MIR1248-201ENST00000629190 106 ntBASIC3.26□□□□□ -1.89
NID1P14543 AC018630.2-201ENST00000534866 2403 ntBASIC3.26□□□□□ -1.89
NID1P14543 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NID1P14543 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.26□□□□□ -1.89
NID1P14543 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NID1P14543 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.25□□□□□ -1.89
NID1P14543 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.25□□□□□ -1.89
NID1P14543 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NID1P14543 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
NID1P14543 MIR126-201ENST00000362291 85 ntBASIC3.25□□□□□ -1.89
NID1P14543 SNORD9-201ENST00000362566 104 ntBASIC3.25□□□□□ -1.89
NID1P14543 RNU6-1083P-201ENST00000384022 107 ntBASIC3.25□□□□□ -1.89
NID1P14543 RNU6-816P-201ENST00000390914 107 ntBASIC3.25□□□□□ -1.89
NID1P14543 RNU6-1268P-201ENST00000391214 107 ntBASIC3.25□□□□□ -1.89
NID1P14543 RNU6-1239P-201ENST00000391310 107 ntBASIC3.25□□□□□ -1.89
NID1P14543 NDUFB4P4-201ENST00000404822 243 ntBASIC3.25□□□□□ -1.89
NID1P14543 MIR548O-201ENST00000408583 114 ntBASIC3.25□□□□□ -1.89
NID1P14543 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
NID1P14543 BX510359.1-201ENST00000456973 237 ntBASIC3.25□□□□□ -1.89
NID1P14543 SNORD105B-201ENST00000458770 79 ntBASIC3.25□□□□□ -1.89
NID1P14543 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.25□□□□□ -1.89
NID1P14543 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.25□□□□□ -1.89
NID1P14543 RNU6-856P-201ENST00000516959 98 ntBASIC3.25□□□□□ -1.89
NID1P14543 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
NID1P14543 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.25□□□□□ -1.89
NID1P14543 MIR3186-201ENST00000577404 85 ntBASIC3.25□□□□□ -1.89
NID1P14543 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
NID1P14543 MIR5195-201ENST00000583555 115 ntBASIC3.25□□□□□ -1.89
NID1P14543 AC007229.1-201ENST00000590455 412 ntBASIC3.25□□□□□ -1.89
NID1P14543 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NID1P14543 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
NID1P14543 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NID1P14543 AL355596.1-201ENST00000565399 3996 ntBASIC3.25□□□□□ -1.89
NID1P14543 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NID1P14543 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.25□□□□□ -1.89
NID1P14543 PWAR6-201ENST00000552334 4618 ntBASIC3.25□□□□□ -1.89
NID1P14543 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NID1P14543 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NID1P14543 RNU1-133P-201ENST00000364867 167 ntBASIC3.24□□□□□ -1.89
NID1P14543 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.24□□□□□ -1.89
NID1P14543 RNU7-99P-201ENST00000516271 62 ntBASIC3.24□□□□□ -1.89
NID1P14543 AC022523.2-201ENST00000561045 150 ntBASIC3.24□□□□□ -1.89
NID1P14543 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
NID1P14543 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NID1P14543 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NID1P14543 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NID1P14543 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NID1P14543 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
NID1P14543 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NID1P14543 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NID1P14543 RNY1P1-201ENST00000364372 112 ntBASIC3.23□□□□□ -1.89
NID1P14543 Y_RNA.267-201ENST00000364679 109 ntBASIC3.23□□□□□ -1.89
NID1P14543 Y_RNA.290-201ENST00000364879 114 ntBASIC3.23□□□□□ -1.89
NID1P14543 RNU6-1104P-201ENST00000384723 104 ntBASIC3.23□□□□□ -1.89
NID1P14543 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
NID1P14543 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.23□□□□□ -1.89
NID1P14543 AC022137.1-201ENST00000483735 151 ntBASIC3.23□□□□□ -1.89
NID1P14543 SNORA70.19-201ENST00000516717 90 ntBASIC3.23□□□□□ -1.89
NID1P14543 AC005000.2-201ENST00000605468 310 ntBASIC3.23□□□□□ -1.89
NID1P14543 IGLL4P-201ENST00000614590 133 ntBASIC3.23□□□□□ -1.89
NID1P14543 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
NID1P14543 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NID1P14543 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
NID1P14543 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.22□□□□□ -1.89
NID1P14543 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
NID1P14543 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NID1P14543 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.22□□□□□ -1.89
NID1P14543 Y_RNA.10-201ENST00000362371 110 ntBASIC3.22□□□□□ -1.89
NID1P14543 RNU1-72P-201ENST00000362976 153 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms