Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC233266.1-201ENST00000454518 96 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 AC096725.1-201ENST00000514266 313 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 RN7SKP19-201ENST00000516016 252 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 RNU2-60P-201ENST00000517290 128 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 NDUFA5P6-201ENST00000542110 379 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 AC242852.1-201ENST00000612151 96 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 U6.73-201ENST00000619194 103 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 AC244015.1-201ENST00000622301 99 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 AC080128.1-201ENST00000474389 1917 ntBASIC3.4□□□□□ -1.87
HOXD8P13378 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD8P13378 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXD8P13378 RNA5SP139-201ENST00000364340 117 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 Y_RNA.486-201ENST00000384398 107 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 MIR562-201ENST00000384894 95 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 MIR624-201ENST00000385217 97 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD8P13378 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD8P13378 RNU6-504P-201ENST00000516568 104 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 SCARNA11.3-201ENST00000517276 130 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 MIR3129-201ENST00000581095 76 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 AC073413.2-201ENST00000604332 360 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 AC022217.4-201ENST00000604389 163 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 AC090115.4-201ENST00000609970 188 ntBASIC3.39□□□□□ -1.87
HOXD8P13378 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXD8P13378 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXD8P13378 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD8P13378 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD8P13378 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD8P13378 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD8P13378 AC096644.4-201ENST00000563417 2912 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD8P13378 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXD8P13378 RNU6-1138P-201ENST00000365359 106 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 MIR520G-201ENST00000385064 90 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 RNU1-101P-201ENST00000391171 127 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 MIR1263-201ENST00000408324 86 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 Y_RNA.617-201ENST00000410920 90 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 EEF1A1P41-201ENST00000414667 207 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 RPS15AP28-201ENST00000435088 386 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 AF228730.3-201ENST00000436691 102 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD8P13378 AL031737.1-201ENST00000450125 223 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 RNU6-991P-201ENST00000516168 107 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 AC002064.3-201ENST00000623448 346 ntBASIC3.38□□□□□ -1.87
HOXD8P13378 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HOXD8P13378 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD8P13378 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HOXD8P13378 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HOXD8P13378 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
HOXD8P13378 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD8P13378 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD8P13378 AL136360.1-201ENST00000503377 1900 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 MIR450A1-201ENST00000362262 91 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 RNU1-72P-201ENST00000362976 153 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 Y_RNA.369-201ENST00000365568 117 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 FO393413.1-201ENST00000402892 195 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 AL513477.1-202ENST00000417061 214 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 AC244505.4-201ENST00000434905 287 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD8P13378 SSXP5-201ENST00000443473 287 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 RNU6-537P-201ENST00000517277 103 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD8P13378 MIR5739-201ENST00000619803 80 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 MIR7157-201ENST00000635801 60 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXD8P13378 MIR7515-201ENST00000637837 67 ntBASIC3.37□□□□□ -1.87
HOXD8P13378 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD8P13378 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HOXD8P13378 AC245060.5-201ENST00000610778 3293 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 MTND5P18-201ENST00000445624 1801 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 RNU11-5P-201ENST00000391216 129 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXD8P13378 AL021397.1-201ENST00000451806 248 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 HMGN1P18-201ENST00000457642 277 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD8P13378 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 RNU6-1146P-201ENST00000516282 102 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 SCARNA3-201ENST00000517097 143 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 RNU6-1270P-201ENST00000517128 108 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 AC007751.1-201ENST00000529260 376 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
HOXD8P13378 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXD8P13378 AL365205.2-201ENST00000594586 68 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
HOXD8P13378 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXD8P13378 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXD8P13378 RNU6-32P-201ENST00000383948 107 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 RNU6-13P-201ENST00000384248 107 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 RNU6-851P-201ENST00000384565 107 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 RNU6-12P-201ENST00000384604 107 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 RNU6-41P-201ENST00000384741 107 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 MIR802-201ENST00000390235 94 ntBASIC3.35□□□□□ -1.87
HOXD8P13378 MIR891A-201ENST00000401237 79 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms