Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 RNU6-144P-201ENST00000383951 107 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 RNU6-959P-201ENST00000384671 107 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 MIR616-201ENST00000385293 97 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 MIR1294-201ENST00000408503 142 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 AC244505.4-201ENST00000434905 287 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 AL161788.1-201ENST00000441805 169 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 SSXP5-201ENST00000443473 287 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 RNU7-141P-201ENST00000459304 62 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 HMGN2P9-201ENST00000476875 229 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.93□□□□□ -1.94
COL6A1P12109 MIR4753-201ENST00000585119 83 ntBASIC2.93□□□□□ -1.94
COL6A1P12109 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
COL6A1P12109 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
COL6A1P12109 MIR367-201ENST00000362299 68 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 SNORD50B-201ENST00000364995 70 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 RNU6-969P-201ENST00000383900 105 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 RNU6-22P-201ENST00000384355 107 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 MIR27B-201ENST00000385129 97 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 MIR1283-1-201ENST00000408494 87 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 HSPE1P21-201ENST00000438283 308 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 RNU7-14P-201ENST00000459331 62 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.92□□□□□ -1.94
COL6A1P12109 RNU6-479P-201ENST00000516348 105 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 RNU6-1007P-201ENST00000516586 107 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 RNU7-121P-201ENST00000516604 62 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL6A1P12109 MIR4724-201ENST00000579485 89 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 MIR548X2-201ENST00000579776 100 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL6A1P12109 AL391903.3-201ENST00000612158 163 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 MIR203B-201ENST00000636080 86 ntBASIC2.92□□□□□ -1.94
COL6A1P12109 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL6A1P12109 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.92□□□□□ -1.94
COL6A1P12109 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.91□□□□□ -1.94
COL6A1P12109 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.91□□□□□ -1.94
COL6A1P12109 ZNF271P-202ENST00000465539 1970 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 RNU6-271P-201ENST00000363858 105 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
COL6A1P12109 MIR873-201ENST00000401120 77 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 AC090515.1-201ENST00000465295 476 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 RNU6-313P-201ENST00000516317 112 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 RNU6-426P-201ENST00000516464 97 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 AC109810.1-201ENST00000534066 224 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 MIR3126-201ENST00000577443 74 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 DNAJC19P2-201ENST00000593340 302 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 U4.3-201ENST00000621047 82 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL6A1P12109 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL6A1P12109 AL159152.1-201ENST00000635019 2587 ntBASIC2.91□□□□□ -1.94
COL6A1P12109 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.94
COL6A1P12109 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.9□□□□□ -1.94
COL6A1P12109 Y_RNA.337-201ENST00000365312 102 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 MIR513C-201ENST00000401352 84 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 RPL23AP7-203ENST00000449021 469 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 HSPE1P13-201ENST00000451143 297 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 RNU7-57P-201ENST00000459540 60 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 AC022616.8-201ENST00000533569 253 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
COL6A1P12109 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL6A1P12109 MIR569-201ENST00000385228 96 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 RNU6-1154P-201ENST00000391001 104 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 Y_RNA.586-201ENST00000391146 98 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 RNA5SP270-201ENST00000411361 118 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 RPL30P13-201ENST00000418873 348 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 AL356320.1-201ENST00000429616 163 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 HMGN2P3-201ENST00000433603 273 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 HMGN2P5-201ENST00000436882 273 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.89□□□□□ -1.95
COL6A1P12109 AC245047.8-201ENST00000456455 284 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 AC010409.1-201ENST00000487382 476 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 RNU6-548P-201ENST00000517083 115 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 snoZ196.1-201ENST00000625269 89 ntBASIC2.89□□□□□ -1.95
COL6A1P12109 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.89□□□□□ -1.95
COL6A1P12109 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
COL6A1P12109 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL6A1P12109 RNU6-199P-201ENST00000362954 107 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 RNU6-234P-201ENST00000365229 104 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 MIR561-201ENST00000385216 97 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 RNU6-1228P-201ENST00000391014 107 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 Z82209.1-201ENST00000422141 2135 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.88□□□□□ -1.95
COL6A1P12109 AL121914.1-201ENST00000450188 156 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 AC011753.1-201ENST00000451001 220 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 SNORD14A-201ENST00000606526 91 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 MIR548AY-201ENST00000617669 107 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 AC068647.2-201ENST00000637380 353 ntBASIC2.88□□□□□ -1.95
COL6A1P12109 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL6A1P12109 AC068700.1-201ENST00000565862 3754 ntBASIC2.87□□□□□ -1.95
COL6A1P12109 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
COL6A1P12109 RNU4-11P-201ENST00000365287 132 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms