Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.308-201ENST00000365043 101 ntBASIC2.41□□□□□ -2.02
RHOP08100 RNU6-418P-201ENST00000384035 107 ntBASIC2.41□□□□□ -2.02
RHOP08100 SNORD14D-201ENST00000384390 87 ntBASIC2.41□□□□□ -2.02
RHOP08100 CR769767.1-201ENST00000436337 346 ntBASIC2.41□□□□□ -2.02
RHOP08100 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.41□□□□□ -2.02
RHOP08100 RPL36AP21-201ENST00000490372 323 ntBASIC2.41□□□□□ -2.02
RHOP08100 RNY3P16-201ENST00000516338 101 ntBASIC2.41□□□□□ -2.02
RHOP08100 RNU6-861P-201ENST00000516745 106 ntBASIC2.41□□□□□ -2.02
RHOP08100 SUMO2P18-201ENST00000518873 252 ntBASIC2.41□□□□□ -2.02
RHOP08100 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.41□□□□□ -2.02
RHOP08100 MIR4658-201ENST00000584344 65 ntBASIC2.41□□□□□ -2.02
RHOP08100 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
RHOP08100 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RHOP08100 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RHOP08100 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
RHOP08100 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RHOP08100 SNORD114-1-201ENST00000362705 72 ntBASIC2.4□□□□□ -2.03
RHOP08100 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
RHOP08100 RNU4-17P-201ENST00000365598 141 ntBASIC2.4□□□□□ -2.03
RHOP08100 RNU6-493P-201ENST00000391321 108 ntBASIC2.4□□□□□ -2.03
RHOP08100 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
RHOP08100 HMGB3P3-201ENST00000510526 400 ntBASIC2.4□□□□□ -2.03
RHOP08100 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
RHOP08100 RNU6-856P-201ENST00000516959 98 ntBASIC2.4□□□□□ -2.03
RHOP08100 AC022559.1-201ENST00000520905 205 ntBASIC2.4□□□□□ -2.03
RHOP08100 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
RHOP08100 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RHOP08100 AP006437.1-201ENST00000641440 3685 ntBASIC2.4□□□□□ -2.03
RHOP08100 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
RHOP08100 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
RHOP08100 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RHOP08100 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
RHOP08100 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RHOP08100 MIR340-201ENST00000362125 95 ntBASIC2.39□□□□□ -2.03
RHOP08100 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
RHOP08100 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
RHOP08100 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
RHOP08100 AC018634.1-201ENST00000437554 401 ntBASIC2.39□□□□□ -2.03
RHOP08100 RPS20P10-201ENST00000451209 253 ntBASIC2.39□□□□□ -2.03
RHOP08100 snoU13.23-201ENST00000458863 104 ntBASIC2.39□□□□□ -2.03
RHOP08100 RNU7-141P-201ENST00000459304 62 ntBASIC2.39□□□□□ -2.03
RHOP08100 AC087441.2-201ENST00000529141 262 ntBASIC2.39□□□□□ -2.03
RHOP08100 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.39□□□□□ -2.03
RHOP08100 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
RHOP08100 AC068700.1-201ENST00000565862 3754 ntBASIC2.39□□□□□ -2.03
RHOP08100 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RHOP08100 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
RHOP08100 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RHOP08100 Y_RNA.121-201ENST00000363309 113 ntBASIC2.38□□□□□ -2.03
RHOP08100 SNORA25B-201ENST00000365507 128 ntBASIC2.38□□□□□ -2.03
RHOP08100 SRIP3-201ENST00000413200 219 ntBASIC2.38□□□□□ -2.03
RHOP08100 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
RHOP08100 AC010154.1-201ENST00000425857 269 ntBASIC2.38□□□□□ -2.03
RHOP08100 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.38□□□□□ -2.03
RHOP08100 Y_RNA.662-201ENST00000516028 97 ntBASIC2.38□□□□□ -2.03
RHOP08100 RNU6-991P-201ENST00000516168 107 ntBASIC2.38□□□□□ -2.03
RHOP08100 RNU6-1337P-201ENST00000516525 95 ntBASIC2.38□□□□□ -2.03
RHOP08100 RNU6-667P-201ENST00000517186 102 ntBASIC2.38□□□□□ -2.03
RHOP08100 MIR5688-201ENST00000580619 83 ntBASIC2.38□□□□□ -2.03
RHOP08100 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
RHOP08100 AC004832.4-201ENST00000608952 331 ntBASIC2.38□□□□□ -2.03
RHOP08100 FO624990.1-201ENST00000636373 85 ntBASIC2.38□□□□□ -2.03
RHOP08100 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RHOP08100 AC134026.1-201ENST00000623249 2239 ntBASIC2.37□□□□□ -2.03
RHOP08100 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RHOP08100 CENPCP1-201ENST00000533085 2578 ntBASIC2.37□□□□□ -2.03
RHOP08100 Y_RNA.7-201ENST00000362352 102 ntBASIC2.37□□□□□ -2.03
RHOP08100 RNA5SP393-201ENST00000363423 117 ntBASIC2.37□□□□□ -2.03
RHOP08100 Y_RNA.172-201ENST00000363765 102 ntBASIC2.37□□□□□ -2.03
RHOP08100 RNU6-1048P-201ENST00000364054 107 ntBASIC2.37□□□□□ -2.03
RHOP08100 RNU6-743P-201ENST00000364151 106 ntBASIC2.37□□□□□ -2.03
RHOP08100 Y_RNA.571-201ENST00000384753 98 ntBASIC2.37□□□□□ -2.03
RHOP08100 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
RHOP08100 MIR526A2-201ENST00000390198 65 ntBASIC2.37□□□□□ -2.03
RHOP08100 MTCO2P33-201ENST00000402100 465 ntBASIC2.37□□□□□ -2.03
RHOP08100 RNA5SP20-201ENST00000515976 84 ntBASIC2.37□□□□□ -2.03
RHOP08100 RNU1-104P-201ENST00000517280 175 ntBASIC2.37□□□□□ -2.03
RHOP08100 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
RHOP08100 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.37□□□□□ -2.03
RHOP08100 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
RHOP08100 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.37□□□□□ -2.03
RHOP08100 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RHOP08100 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
RHOP08100 MIR21-201ENST00000362134 72 ntBASIC2.36□□□□□ -2.03
RHOP08100 RNU6-117P-201ENST00000365415 107 ntBASIC2.36□□□□□ -2.03
RHOP08100 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
RHOP08100 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RHOP08100 MIR764-201ENST00000390811 85 ntBASIC2.36□□□□□ -2.03
RHOP08100 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
RHOP08100 AL591806.2-201ENST00000433122 173 ntBASIC2.36□□□□□ -2.03
RHOP08100 AC074198.2-201ENST00000508153 258 ntBASIC2.36□□□□□ -2.03
RHOP08100 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.36□□□□□ -2.03
RHOP08100 RNU6-1219P-201ENST00000516143 112 ntBASIC2.36□□□□□ -2.03
RHOP08100 AP003357.1-201ENST00000604497 148 ntBASIC2.36□□□□□ -2.03
RHOP08100 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.36□□□□□ -2.03
RHOP08100 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RHOP08100 Y_RNA.99-201ENST00000363138 105 ntBASIC2.35□□□□□ -2.03
RHOP08100 RNU6-407P-201ENST00000365280 104 ntBASIC2.35□□□□□ -2.03
RHOP08100 DEFA7P-201ENST00000382676 285 ntBASIC2.35□□□□□ -2.03
RHOP08100 RNU6-144P-201ENST00000383951 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms