Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 CHEK2P4-201ENST00000450340 246 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
MMP1P03956 RN7SKP49-201ENST00000516675 260 ntBASIC1.2□□□□□ -2.22
MMP1P03956 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.2□□□□□ -2.22
MMP1P03956 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
MMP1P03956 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
MMP1P03956 Y_RNA.36-201ENST00000362602 112 ntBASIC1.19□□□□□ -2.22
MMP1P03956 RNU6-879P-201ENST00000364328 108 ntBASIC1.19□□□□□ -2.22
MMP1P03956 Y_RNA.384-201ENST00000383909 102 ntBASIC1.19□□□□□ -2.22
MMP1P03956 RNU6-1040P-201ENST00000383974 107 ntBASIC1.19□□□□□ -2.22
MMP1P03956 Y_RNA.463-201ENST00000384271 102 ntBASIC1.19□□□□□ -2.22
MMP1P03956 Y_RNA.496-201ENST00000384444 101 ntBASIC1.19□□□□□ -2.22
MMP1P03956 MRPL35P1-201ENST00000404272 572 ntBASIC1.19□□□□□ -2.22
MMP1P03956 AC008134.1-201ENST00000420943 193 ntBASIC1.19□□□□□ -2.22
MMP1P03956 RNU6-1146P-201ENST00000516282 102 ntBASIC1.19□□□□□ -2.22
MMP1P03956 RNU6-699P-201ENST00000517081 110 ntBASIC1.19□□□□□ -2.22
MMP1P03956 RAB11AP2-201ENST00000545905 639 ntBASIC1.19□□□□□ -2.22
MMP1P03956 Y_RNA.804-201ENST00000615262 101 ntBASIC1.19□□□□□ -2.22
MMP1P03956 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.18□□□□□ -2.22
MMP1P03956 AC073544.1-201ENST00000600110 1595 ntBASIC1.18□□□□□ -2.22
MMP1P03956 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP1P03956 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MMP1P03956 MIR410-201ENST00000362222 80 ntBASIC1.18□□□□□ -2.22
MMP1P03956 RNU6-1115P-201ENST00000362490 106 ntBASIC1.18□□□□□ -2.22
MMP1P03956 RNU4-73P-201ENST00000363164 141 ntBASIC1.18□□□□□ -2.22
MMP1P03956 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MMP1P03956 SNORD12B-201ENST00000410433 91 ntBASIC1.18□□□□□ -2.22
MMP1P03956 COX6CP10-201ENST00000416832 224 ntBASIC1.18□□□□□ -2.22
MMP1P03956 MTND4P28-201ENST00000426217 387 ntBASIC1.18□□□□□ -2.22
MMP1P03956 TOMM22P2-201ENST00000430735 237 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AC005002.2-201ENST00000438228 269 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AL606517.2-201ENST00000442855 241 ntBASIC1.18□□□□□ -2.22
MMP1P03956 UBE2V1P7-201ENST00000446395 340 ntBASIC1.18□□□□□ -2.22
MMP1P03956 UQCRBP2-201ENST00000447827 297 ntBASIC1.18□□□□□ -2.22
MMP1P03956 RPS27P1-201ENST00000450552 247 ntBASIC1.18□□□□□ -2.22
MMP1P03956 PCNPP5-201ENST00000452246 481 ntBASIC1.18□□□□□ -2.22
MMP1P03956 SNORD65B-201ENST00000459126 73 ntBASIC1.18□□□□□ -2.22
MMP1P03956 MTND3P22-201ENST00000510932 243 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AC074133.1-201ENST00000515696 183 ntBASIC1.18□□□□□ -2.22
MMP1P03956 SNORA40.9-201ENST00000515895 93 ntBASIC1.18□□□□□ -2.22
MMP1P03956 RNU6-264P-201ENST00000517134 104 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AC019176.1-201ENST00000518519 225 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.18□□□□□ -2.22
MMP1P03956 AC018448.1-201ENST00000552843 316 ntBASIC1.18□□□□□ -2.22
MMP1P03956 MIR3937-201ENST00000580135 106 ntBASIC1.18□□□□□ -2.22
MMP1P03956 MIR4795-201ENST00000584182 89 ntBASIC1.18□□□□□ -2.22
MMP1P03956 AL117336.2-201ENST00000602435 335 ntBASIC1.18□□□□□ -2.22
MMP1P03956 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.18□□□□□ -2.22
MMP1P03956 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
MMP1P03956 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
MMP1P03956 AC091925.1-201ENST00000623204 462 ntBASIC1.18□□□□□ -2.22
MMP1P03956 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.18□□□□□ -2.22
MMP1P03956 RNU6-490P-201ENST00000362985 107 ntBASIC1.17□□□□□ -2.22
MMP1P03956 Y_RNA.187-201ENST00000363918 113 ntBASIC1.17□□□□□ -2.22
MMP1P03956 RNU6-454P-201ENST00000364292 107 ntBASIC1.17□□□□□ -2.22
MMP1P03956 Y_RNA.315-201ENST00000365117 102 ntBASIC1.17□□□□□ -2.22
MMP1P03956 SNORA4.2-201ENST00000365313 147 ntBASIC1.17□□□□□ -2.22
MMP1P03956 RNU6-1264P-201ENST00000383891 107 ntBASIC1.17□□□□□ -2.22
MMP1P03956 RNU6-708P-201ENST00000384217 107 ntBASIC1.17□□□□□ -2.22
MMP1P03956 MIR625-201ENST00000385047 85 ntBASIC1.17□□□□□ -2.22
MMP1P03956 SNORA69.1-201ENST00000390904 137 ntBASIC1.17□□□□□ -2.22
MMP1P03956 AL355796.1-201ENST00000406706 323 ntBASIC1.17□□□□□ -2.22
MMP1P03956 AC114482.1-201ENST00000418010 247 ntBASIC1.17□□□□□ -2.22
MMP1P03956 MTND4LP11-201ENST00000422184 280 ntBASIC1.17□□□□□ -2.22
MMP1P03956 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.17□□□□□ -2.22
MMP1P03956 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.17□□□□□ -2.22
MMP1P03956 RPL30P7-201ENST00000479312 323 ntBASIC1.17□□□□□ -2.22
MMP1P03956 AL163195.1-201ENST00000496941 348 ntBASIC1.17□□□□□ -2.22
MMP1P03956 RNU6-107P-201ENST00000516643 102 ntBASIC1.17□□□□□ -2.22
MMP1P03956 AC055872.1-201ENST00000570978 278 ntBASIC1.17□□□□□ -2.22
MMP1P03956 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
MMP1P03956 U6.73-201ENST00000619194 103 ntBASIC1.17□□□□□ -2.22
MMP1P03956 AC104985.2-201ENST00000620598 500 ntBASIC1.17□□□□□ -2.22
MMP1P03956 Y_RNA.5-201ENST00000362334 102 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RNU4-79P-201ENST00000362764 141 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RNA5SP325-201ENST00000363756 130 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RNU6-961P-201ENST00000363893 105 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
MMP1P03956 MIR1253-201ENST00000408273 105 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.16□□□□□ -2.22
MMP1P03956 RAB28P5-201ENST00000427490 651 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC096644.2-201ENST00000429278 159 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
MMP1P03956 RNU7-169P-201ENST00000459456 61 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RPS26P45-201ENST00000471748 340 ntBASIC1.16□□□□□ -2.22
MMP1P03956 RNU7-4P-201ENST00000516961 62 ntBASIC1.16□□□□□ -2.22
MMP1P03956 MIR2355-201ENST00000517199 87 ntBASIC1.16□□□□□ -2.22
MMP1P03956 CYCSP23-201ENST00000519781 313 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.16□□□□□ -2.22
MMP1P03956 AC024995.1-201ENST00000523014 93 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AL442163.3-201ENST00000554110 156 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.16□□□□□ -2.22
MMP1P03956 AC022432.1-201ENST00000595739 310 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC022217.4-201ENST00000604389 163 ntBASIC1.16□□□□□ -2.22
MMP1P03956 AC133104.2-201ENST00000615272 193 ntBASIC1.16□□□□□ -2.22
MMP1P03956 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
MMP1P03956 SNORA20B-201ENST00000384220 132 ntBASIC1.15□□□□□ -2.23
MMP1P03956 RNY3P4-201ENST00000384428 101 ntBASIC1.15□□□□□ -2.23
MMP1P03956 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms