Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RPS29P11-201ENST00000496507 171 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 AC010598.1-201ENST00000510378 103 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 AC025647.1-201ENST00000517879 253 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.93□□□□□ -1.94
RAPGEF3O95398 DEFB117-201ENST00000602356 141 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 RNU6-271P-201ENST00000363858 105 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 SNORD14D-201ENST00000384390 87 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 MIR524-201ENST00000385242 87 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.92□□□□□ -1.94
RAPGEF3O95398 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.92□□□□□ -1.94
RAPGEF3O95398 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RAPGEF3O95398 RNU6-191P-201ENST00000516295 94 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 RNU6-856P-201ENST00000516959 98 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 RNU6-388P-201ENST00000517012 105 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 RNU6-389P-201ENST00000517048 105 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 RNU1-104P-201ENST00000517280 175 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 CYCSP26-201ENST00000534107 320 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 DNAJC19P9-201ENST00000555084 351 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 MIR4658-201ENST00000584344 65 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 MIR203B-201ENST00000636080 86 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 FO624990.1-201ENST00000636373 85 ntBASIC2.92□□□□□ -1.94
RAPGEF3O95398 Y_RNA.54-201ENST00000362766 105 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 RNU4-80P-201ENST00000363200 141 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 SNORD27-201ENST00000363981 72 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 Y_RNA.257-201ENST00000364596 102 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 Y_RNA.275-201ENST00000364726 110 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 RNU6-1240P-201ENST00000365155 104 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.91□□□□□ -1.94
RAPGEF3O95398 RNU6-250P-201ENST00000516958 103 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 AC026271.5-201ENST00000577873 130 ntBASIC2.91□□□□□ -1.94
RAPGEF3O95398 Y_RNA.277-201ENST00000364754 102 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 Y_RNA.515-201ENST00000384535 112 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 MIR873-201ENST00000401120 77 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 RNU2-61P-201ENST00000411069 191 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 AL139109.1-201ENST00000455491 297 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 RNU1-131P-201ENST00000458943 161 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 SNORD65B-201ENST00000459126 73 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 RNU7-95P-201ENST00000459222 64 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 RNU4-71P-201ENST00000516258 113 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.9□□□□□ -1.95
RAPGEF3O95398 AL162424.1-201ENST00000602325 221 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 AC010900.2-201ENST00000604508 210 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 AC090425.1-201ENST00000610007 140 ntBASIC2.9□□□□□ -1.95
RAPGEF3O95398 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RAPGEF3O95398 MIR340-201ENST00000362125 95 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 SNORA20B-201ENST00000384220 132 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 Y_RNA.539-201ENST00000384635 107 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.89□□□□□ -1.95
RAPGEF3O95398 RNU6-111P-201ENST00000517179 105 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 RPL21P9-201ENST00000556149 474 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.89□□□□□ -1.95
RAPGEF3O95398 MIR3145-201ENST00000580727 82 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
RAPGEF3O95398 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RAPGEF3O95398 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
RAPGEF3O95398 RNY1-201ENST00000364228 113 ntBASIC2.88□□□□□ -1.95
RAPGEF3O95398 AL355796.1-201ENST00000406706 323 ntBASIC2.88□□□□□ -1.95
RAPGEF3O95398 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.88□□□□□ -1.95
RAPGEF3O95398 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
RAPGEF3O95398 RPL23AP7-203ENST00000449021 469 ntBASIC2.88□□□□□ -1.95
RAPGEF3O95398 MIR3668-201ENST00000582138 75 ntBASIC2.88□□□□□ -1.95
RAPGEF3O95398 SNORA27.1-201ENST00000362604 124 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.82-201ENST00000363000 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.92-201ENST00000363043 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.235-201ENST00000364412 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 RNU6-740P-201ENST00000364734 105 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.306-201ENST00000365015 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.312-201ENST00000365089 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.322-201ENST00000365151 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 RNU6-160P-201ENST00000384591 107 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 AC016909.1-201ENST00000415916 166 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 AC010154.1-201ENST00000425857 269 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.650-201ENST00000459002 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 RNU6-1146P-201ENST00000516282 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.777-201ENST00000516982 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 AC009127.3-201ENST00000570531 403 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 MIR3126-201ENST00000577443 74 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.771-201ENST00000598668 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 MIR6504-201ENST00000613520 61 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 AC078938.1-201ENST00000620993 318 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 Y_RNA.789-201ENST00000622480 102 ntBASIC2.87□□□□□ -1.95
RAPGEF3O95398 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RAPGEF3O95398 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RAPGEF3O95398 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.86□□□□□ -1.95
RAPGEF3O95398 Y_RNA.217-201ENST00000364214 105 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 RNU6-338P-201ENST00000383888 105 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 SNORA67.5-201ENST00000391036 107 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 MIR1262-201ENST00000408276 93 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 HSPE1P13-201ENST00000451143 297 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 Y_RNA.641-201ENST00000459414 105 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 SUMO2P18-201ENST00000518873 252 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 IGLV3-17-201ENST00000519099 244 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.86□□□□□ -1.95
RAPGEF3O95398 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
RAPGEF3O95398 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms