Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Y_RNA.801-201ENST00000619005 101 ntBASIC1.73□□□□□ -2.13
NKX2-2O95096 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
NKX2-2O95096 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-2O95096 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-2O95096 SNORD114-1-201ENST00000362705 72 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 MIR562-201ENST00000384894 95 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 RNU4-30P-201ENST00000410245 143 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 AC010655.3-201ENST00000478818 450 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX2-2O95096 RNU6-341P-201ENST00000516973 96 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 SNORA44.1-201ENST00000517031 108 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.72□□□□□ -2.13
NKX2-2O95096 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NKX2-2O95096 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX2-2O95096 Y_RNA.152-201ENST00000363578 100 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 Y_RNA.214-201ENST00000364201 112 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 MIR520G-201ENST00000385064 90 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NKX2-2O95096 RNU6-710P-201ENST00000410424 105 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 COX6CP10-201ENST00000416832 224 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 ELOCP20-201ENST00000422460 345 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 OOSP1P1-201ENST00000423265 274 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 AC091021.1-201ENST00000468051 388 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 SNORA31.10-201ENST00000516482 106 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 SNORA40.15-201ENST00000516884 107 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 MIR4709-201ENST00000577272 72 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 MIR3198-2-201ENST00000577868 80 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.71□□□□□ -2.14
NKX2-2O95096 MIR8074-201ENST00000615081 81 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 MIR8054-201ENST00000620877 86 ntBASIC1.71□□□□□ -2.14
NKX2-2O95096 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.71□□□□□ -2.14
NKX2-2O95096 SNORD113-8-201ENST00000363497 74 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 Y_RNA.210-201ENST00000364161 110 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 Y_RNA.222-201ENST00000364264 102 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 Y_RNA.286-201ENST00000364813 102 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 MIR30A-201ENST00000385092 71 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AL078595.1-201ENST00000404458 226 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AL590004.1-201ENST00000405321 300 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AL162725.1-201ENST00000435405 301 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 HSPE1P21-201ENST00000438283 308 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX2-2O95096 HMGN2P23-201ENST00000456759 269 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 UBL5P3-201ENST00000475112 231 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX2-2O95096 RNU6-63P-201ENST00000516690 95 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX2-2O95096 AC110588.1-201ENST00000559699 137 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 AC006504.6-201ENST00000590142 199 ntBASIC1.7□□□□□ -2.14
NKX2-2O95096 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX2-2O95096 Y_RNA.105-201ENST00000363182 111 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-770P-201ENST00000363929 105 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-1160P-201ENST00000384546 104 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-440P-201ENST00000390882 105 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 Y_RNA.581-201ENST00000391017 97 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-121P-201ENST00000410525 99 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RN7SKP200-201ENST00000410564 320 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 AL445685.2-201ENST00000422551 342 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 HMGN2P38-201ENST00000423806 265 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX2-2O95096 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-1143P-201ENST00000516125 104 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 RNU6-496P-201ENST00000516145 99 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 DEFB117-201ENST00000602356 141 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 AL929325.1-201ENST00000603096 117 ntBASIC1.69□□□□□ -2.14
NKX2-2O95096 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NKX2-2O95096 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NKX2-2O95096 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NKX2-2O95096 Y_RNA.383-201ENST00000383855 97 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 SNORD116-13-201ENST00000384408 92 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 RNU6-1031P-201ENST00000384773 107 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-2O95096 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX2-2O95096 AC024067.1-201ENST00000426199 223 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 HSPE1P25-201ENST00000455484 251 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 LINC01399-202ENST00000458450 244 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 MRPS35P2-201ENST00000508242 191 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 MIR3945-201ENST00000581853 98 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 AC004832.4-201ENST00000608952 331 ntBASIC1.68□□□□□ -2.14
NKX2-2O95096 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-2O95096 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX2-2O95096 RNU4-90P-201ENST00000362773 141 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 Y_RNA.172-201ENST00000363765 102 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 Y_RNA.368-201ENST00000365547 113 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 RNU6-102P-201ENST00000384485 104 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 MIR194-1-201ENST00000384892 85 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 SNORA12.1-201ENST00000390873 148 ntBASIC1.67□□□□□ -2.14
NKX2-2O95096 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms